# Transcriptomic and Functional Comparison of Cells Isolated From Healthy and Degenerated Ovine Intervertebral Discs

**Authors:** Paul Humbert, Lucie Danet, Emmaëlle Carrot, Floriane Etienne, Boris Halgand, Frédéric Blanchard, Claire Vinatier, Jérôme Guicheux, Marion Fusellier, Catherine Le Visage, Romain Guiho

PMC · DOI: 10.1111/jcmm.71026 · 2026-01-22

## TL;DR

This study compares cells from healthy and degenerated sheep spinal discs to understand disc degeneration and validate sheep as a model for human disc disease.

## Contribution

The study validates sheep disc cells as a suitable in vitro model for disc degeneration and shows conserved transcriptional patterns with human degenerated discs.

## Key findings

- Aged sheep disc cells show upregulated inflammatory and senescence-related genes compared to young cells.
- Transcriptomic profiles of sheep disc cells align with human degenerated disc transcriptional modules.
- Functional responses of young and aged sheep disc cells are similar under stress conditions.

## Abstract

Intervertebral disc degeneration (IVDD) is a leading cause of chronic low back pain, yet its cellular and molecular mechanisms remain incompletely understood. Sheep represent a valuable in vivo and ex vivo model for IVDD due to their anatomical and biomechanical similarities with humans and the possibility to access disc samples at early stages of degeneration. In vitro, isolated annulus fibrosus (AF) and nucleus pulposus (NP) cells may provide insights into age‐associated degenerative processes; this work investigates how well they capture senescence and metabolic alterations observed in vivo. Transcriptomic profiling of AF and NP cells from healthy young lambs and mildly degenerated aged sheep revealed distinct age‐ and tissue‐specific signatures, with upregulation of inflammatory mediators, ECM‐remodelling enzymes, and senescence‐associated genes in aged cells. Cross‐species deconvolution using a human single‐cell RNA‐sequencing reference confirmed conserved transcriptional modules between aged sheep and human degenerated discs, underscoring the model's translational relevance. However, functional assays demonstrated comparable responses of young and aged cells under basal conditions and after exposure to pro‐degenerative stressors (IL‐1β, senescence induction). Altogether, these findings validate sheep cells as a suitable in vitro model for studying disc degeneration mechanisms and for preclinical testing, although aged donors offer no clear additional functional benefits.

## Linked entities

- **Genes:** IL1B (interleukin 1 beta) [NCBI Gene 3553]
- **Diseases:** intervertebral disc degeneration (MONDO:0011385)
- **Species:** Ovis aries (taxon 9940), Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** COL1A1 (collagen type I alpha 1 chain) [NCBI Gene 1277] {aka CAFYD, EDSARTH1, EDSC, OI1, OI2, OI3}, FOXP2 (forkhead box P2) [NCBI Gene 93986] {aka CAGH44, SPCH1, TNRC10}, NCAM1 [NCBI Gene 101112759], ESR1 [NCBI Gene 443228], PAX1 (paired box 1) [NCBI Gene 5075] {aka HUP48, OFC2, OTFCS2}, HTRA1 (HtrA serine peptidase 1) [NCBI Gene 5654] {aka ARMD7, CADASIL2, CARASIL, CARASIL2, HtrA, L56}, MMP3 (matrix metallopeptidase 3) [NCBI Gene 4314] {aka CHDS6, MMP-3, SL-1, STMY, STMY1, STR1}, BASP1 [NCBI Gene 101119849], ACAN (aggrecan) [NCBI Gene 176] {aka AGC1, AGCAN, CSPG1, CSPGCP, MSK16, SEDK}, COL2A1 (collagen type II alpha 1 chain) [NCBI Gene 1280] {aka ACG2, ANFH, ANFH1, AOM, COL11A3, EDMMD}, CA12 (carbonic anhydrase 12) [NCBI Gene 771] {aka CA-XII, CAXII, HsT18816, T18816}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, GLB1 (galactosidase beta 1) [NCBI Gene 2720] {aka EBP, ELNR1, MPS4B}, EEPD1 [NCBI Gene 101116563], GREB1 [NCBI Gene 101120397], SOX6 [NCBI Gene 101116170], TDP2 [NCBI Gene 101107315], AKR7A2 [NCBI Gene 101109421], IL-1b [NCBI Gene 443539], NPC1 (NPC intracellular cholesterol transporter 1) [NCBI Gene 4864] {aka NPC, POGZ, SLC65A1}, RUNX2 (RUNX family transcription factor 2) [NCBI Gene 860] {aka AML3, CBF-alpha-1, CBFA1, CCD, CCD1, CLCD}
- **Diseases:** AFC (MESH:D002292), pain (MESH:D010146), herniated disc (MESH:D007405), inflammation (MESH:D007249), disc cell dysfunction (MESH:D009901), chronic (MESH:D002908), degeneration (MESH:D009410), disability (MESH:D009069), hypoxic (MESH:D002534), vertebral deformity (MESH:C535781), Chronic LBP (MESH:D017116), mitochondrial (MESH:D028361), IVDD (MESH:D055959), AF (OMIM:614822), NP (MESH:C537927)
- **Chemicals:** NADH (MESH:D009243), CO2 (MESH:D002245), haematoxylin (MESH:D006416), acyl-CoA (MESH:D000214), NADP (MESH:D009249), Paraformaldehyde (MESH:C003043), unsaturated fatty acid (MESH:D005231), eosin (MESH:D004801), Oxygen (MESH:D010100), CCCP (MESH:D002258), oligomycin (MESH:D009840), rotenone (MESH:D012402), ATP (MESH:D000255), glutamine (MESH:D005973), DMEM phenol red (-), isopentane (MESH:C067038), Alcian blue (MESH:D000423), Etoposide (MESH:D005047), pyruvate (MESH:D019289), glucose (MESH:D005947), DAPI (MESH:C007293), tryptophan (MESH:D014364), 5-ethynyl-2'-deoxyuridine (MESH:C031086)
- **Species:** Homo sapiens (human, species) [taxon 9606], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986], Ovis aries (domestic sheep, species) [taxon 9940]
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12825213/full.md

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Source: https://tomesphere.com/paper/PMC12825213