# Reciprocal regulation of rumen microbiota and epithelial genes in response to small peptide supplementation for feed efficiency in beef cattle

**Authors:** En Liu, Shujun Sun, Yawen Deng, Jiajia Liu, Jintao Xue, Mengmeng Li, Fuguang Xue

PMC · DOI: 10.3389/fvets.2025.1714827 · 2026-01-08

## TL;DR

Adding small peptides to beef cattle diets improves growth and feed efficiency by changing gut microbes and gene activity.

## Contribution

Shows how small peptides regulate rumen microbes and epithelial genes to enhance beef cattle feed efficiency.

## Key findings

- 0.6% and 0.8% SP supplement improved weight gain and digestibility in beef cattle.
- SP increased acetate-producing microbes and up-regulated genes involved in metabolism.
- SP supplementation altered microbial diversity and enriched metabolic pathways in the rumen.

## Abstract

Beef cattle during the finishing phase are predominately fed with high-cereal diets to promote rapid growth, which commonly caused surplus energy supply and nitrogen deficiency, disrupted rumen energy and nitrogen balance (RENB), and reduced feed efficiency. This study aims to determine the effects of small peptide (SP) supplement on reciprocal patterns between rumen microbiota and epithelial genes in regulating nutrient metabolism and feed efficiency of beef cattle.

A total of sixty 12-month-old Simmenthal male beef cattle with the non-significant initial body weight were randomly assigned into the control treatment and arithmetically increased SP additional (0.2%, 0.4%, 0.6%, 0.8% and 1.0%) treatments. Each treatment contains 10 bulls with each bull was considered as one replicate. Growth performances, nutrient digestibility, rumen fermentable parameters, rumen microbiota, and rumen epithelial gene expressions were detected to determine the effects of SP on beef cattle.

0.6% and 0.8% of SP supplement showed the highest average daily weight gain (ADG), neutral detergent fiber (NDF) digestibility, and the lowest feed conversion ratio (FCR) among all treatments, which showed significant discrepancies compared with CON treatment (P < 0.05). Additionally, 0.6% of SP supplement treatment showed a significant higher content of acetate, and acetate/propionate ratio compared with 0.8% and CON treatments(P < 0.05). Therefore, 0.6% of SP supplement treatment was considered as the optimum supplement level and applied for further microbial and rumen epithelial gene expression analysis. SP supplement significantly increased the Alpha diversity and relative abundances of the Acetitomaculum, Butyrivibrio, Pseudobutyrivibrio, Bifidobacterium, and Butyricicoccus (P < 0.05), while decreased the Saccharofermentans, and Selenomonas (P < 0.05). Rumen epithelial results showed SP supplement up-regulated genes of ATP10B, ACSF2, ADGRG6, and GALNT15, while down-regulated genes of ABCC3, GEM, PDK2, and ADIRF. The differential expressed genes mainly enriched into the catalytic activity, pyruvate metabolism, metabolic pathways, protein digestion and absorption pathways. Conclusion. These findings demonstrate that SP supplementation enhances growth performance and rumen function and provide a viable nutritional strategy for improving feed efficiency in finishing beef cattle.

## Linked entities

- **Genes:** ATP10B (ATPase phospholipid transporting 10B (putative)) [NCBI Gene 23120], ACSF2 (acyl-CoA synthetase family member 2) [NCBI Gene 80221], ADGRG6 (adhesion G protein-coupled receptor G6) [NCBI Gene 57211], GALNT15 (polypeptide N-acetylgalactosaminyltransferase 15) [NCBI Gene 117248], ABCC3 (ATP binding cassette subfamily C member 3) [NCBI Gene 8714], GEM (GTP binding protein overexpressed in skeletal muscle) [NCBI Gene 2669], PDK2 (pyruvate dehydrogenase kinase 2) [NCBI Gene 5164], ADIRF (adipogenesis regulatory factor) [NCBI Gene 10974]

## Full-text entities

- **Genes:** ADGRG6 (adhesion G protein-coupled receptor G6) [NCBI Gene 534326] {aka GPR126}, ACSF2 (acyl-CoA synthetase family member 2) [NCBI Gene 768237], GALNT15 (polypeptide N-acetylgalactosaminyltransferase 15) [NCBI Gene 618078] {aka GALNTL2}, ABCC3 (ATP binding cassette subfamily C member 3) [NCBI Gene 533151], PDK2 (pyruvate dehydrogenase kinase 2) [NCBI Gene 524075], ATP10B (ATPase phospholipid transporting 10B (putative)) [NCBI Gene 100336948], ADIRF (adipogenesis regulatory factor) [NCBI Gene 613941] {aka C28H10orf116}, GEM (GTP binding protein overexpressed in skeletal muscle) [NCBI Gene 538437]
- **Diseases:** nitrogen (MESH:D007222)
- **Chemicals:** pyruvate (MESH:D019289), propionate (MESH:D011422), nitrogen (MESH:D009584), acetate (MESH:D000085)
- **Species:** Acetitomaculum (genus) [taxon 31980], Butyricicoccus (genus) [taxon 580596], Butyrivibrio (genus) [taxon 830], Bifidobacterium (genus) [taxon 1678], Bos taurus (bovine, species) [taxon 9913], Pseudobutyrivibrio (genus) [taxon 46205]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12824421/full.md

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Source: https://tomesphere.com/paper/PMC12824421