# Comparative analysis of malignant pleural effusion and peripheral blood reveals unique T cell signatures associated with survival in mesothelioma patients

**Authors:** Nicola Principe, Kofi L P Stevens, Amber-Lee Phung, Melanie McCoy, Joel Kidman, Ali Ismail, Alistair M Cook, Abha Chopra, Mark Watson, Bruce W Robinson, Jenette Creaney, Y C Gary Lee, Jason Waithman, W Joost Lesterhuis, Richard A Lake, Anna K Nowak, Jonathan Chee, Alison M McDonnell

PMC · DOI: 10.1093/oxfimm/iqaf008 · Oxford Open Immunology · 2025-12-24

## TL;DR

This study compares T cell characteristics in fluid near tumors and blood in mesothelioma patients, finding that blood T cells better predict survival.

## Contribution

The study identifies unique T cell signatures in malignant pleural effusion and blood, linking blood T cell markers to patient survival in mesothelioma.

## Key findings

- MPE CD8+ and CD4+ T cells show higher expression of inhibitory receptors like PD-1 compared to blood T cells.
- High PD-1 expression on circulating CD4+ T cells is an independent predictor of poor survival in mesothelioma patients.
- TCRβ repertoires suggest T cells traffic between MPE and blood, with clonal overlap observed.

## Abstract

The success of cancer immunotherapies has highlighted the importance of monitoring the anti-tumour T cell response. Patients with mesothelioma frequently present with a malignant pleural effusion (MPE) that is commonly drained regularly to alleviate symptoms. As MPE contains tumour cells, T cells and cytokines, it provides a unique opportunity to sample immune events at the tumour site. However, there is minimal information on how MPE T cells are distinct from those in the blood, and whether T cell phenotypes unique to each compartment correlate with survival. We characterised T cell populations of matched MPE and blood from 31 mesothelioma patients using flow cytometry and bulk T cell receptor beta (TCRβ) sequencing. MPE CD8+ and CD4+ T cells displayed increased expression of PD-1, TIGIT, LAG-3 and TIM-3 compared to blood, with co-expression of inhibitory receptors greatest on MPE CD8+ T cells with a tissue resident memory T cell phenotype (CD69+CD103+). CD8+ TCRβ repertoires displayed clonal overlap between MPE and blood, suggesting that a majority of T cells traffic between these compartments. Finally, we show that high expression of PD-1 on circulating CD4+ T cells is an independent prognostic factor for poor survival in this patient group. This work suggests that MPE T cell phenotypes differ from those in circulation, with blood-based T cell subsets more sensitive predictors of outcome in this study.

## Linked entities

- **Proteins:** PDCD1 (programmed cell death 1), TIGIT (T cell immunoreceptor with Ig and ITIM domains), LAG3 (lymphocyte activating 3), HAVCR2 (hepatitis A virus cellular receptor 2), CD8A (CD8 subunit alpha), CD4 (CD4 molecule), CD69 (CD69 molecule), ITGAE (integrin subunit alpha E)
- **Diseases:** mesothelioma (MONDO:0005065)

## Full-text entities

- **Genes:** TRBV20OR9-2 (T cell receptor beta variable 20/OR9-2 (non-functional)) [NCBI Gene 6962] {aka CDR3, TCRBV20S2, TCRBV2O, TCRBV2S2O}, IL2RA (interleukin 2 receptor subunit alpha) [NCBI Gene 3559] {aka CD25, IDDM10, IL2R, IMD41, TCGFR, p55}, LAG3 (lymphocyte activating 3) [NCBI Gene 3902] {aka CD223}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, TRX-CAT2-1 (tRNA-iMet (anticodon CAT) 2-1) [NCBI Gene 7212] {aka RNTMI, RNTMI2, TRM1, TRMI1, TRNAM2, TRNAMI1}, ITGAE (integrin subunit alpha E) [NCBI Gene 3682] {aka CD103, HUMINAE}, HAVCR2 (hepatitis A virus cellular receptor 2) [NCBI Gene 84868] {aka CD366, HAVcr-2, KIM-3, SPTCL, TIM3, TIMD-3}, TIGIT (T cell immunoreceptor with Ig and ITIM domains) [NCBI Gene 201633] {aka VSIG9, VSTM3, WUCAM}, CD4 (CD4 molecule) [NCBI Gene 404704], CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}, TCR-B (T cell receptor beta-chain) [NCBI Gene 106506754] {aka TRBJ1-2}, CTLA4 (cytotoxic T-lymphocyte associated protein 4) [NCBI Gene 1493] {aka ALPS5, CD, CD152, CELIAC3, CTLA-4, GRD4}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, CD48 (CD48 molecule) [NCBI Gene 962] {aka BCM1, BLAST, BLAST1, MEM-102, SLAMF2, hCD48}, TNFRSF4 (TNF receptor superfamily member 4) [NCBI Gene 7293] {aka ACT35, CD134, IMD16, OX40, TXGP1L}, TRB (T cell receptor beta locus) [NCBI Gene 6957] {aka TCRB, TRB@}, CD69 (CD69 molecule) [NCBI Gene 969] {aka AIM, BL-AC/P26, CLEC2C, EA1, GP32/28, MLR-3}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, CCR7 (C-C motif chemokine receptor 7) [NCBI Gene 1236] {aka BLR2, CC-CKR-7, CCR-7, CD197, CDw197, CMKBR7}, TOX (thymocyte selection associated high mobility group box) [NCBI Gene 9760] {aka TOX1}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, TRX-CAT1-2 (tRNA-iMet (anticodon CAT) 1-2) [NCBI Gene 7210] {aka RNTMI1, RNTMI2, RNTMT1, TRM1, TRM2, TRMI2}, ICOS (inducible T cell costimulator) [NCBI Gene 29851] {aka AILIM, CD278, CVID1}
- **Diseases:** lung cancer (MESH:D008175), melanoma (MESH:D008545), Cancer (MESH:D009369), ovarian cancer (MESH:D010051), pleural mesothelioma (MESH:D000086002), infections (MESH:D007239), MPE (MESH:D016066), NSCLC (MESH:D002289), sarcomatoid (MESH:D002292), pleural infection (MESH:D010995), lung adenocarcinoma (MESH:D000077192), pleural effusion (MESH:D010996), Mesothelioma (MESH:D008654), TRMs (MESH:D008569), death (MESH:D003643), Asbestos Related Diseases (MESH:D001195), Diseases (MESH:D004194), ICB (MESH:D007154)
- **Chemicals:** Ca2+ (-), talc (MESH:D013627), phenol red (MESH:D010637), nitrogen (MESH:D009584), PBS (MESH:D007854), EDTA (MESH:D004492), asbestos (MESH:D001194)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** MPE — Homo sapiens (Human), Gastroesophageal junction adenocarcinoma, Cancer cell line (CVCL_ZW85), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Full text

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## Figures

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## References

82 references — full list in the complete paper: https://tomesphere.com/paper/PMC12823008/full.md

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Source: https://tomesphere.com/paper/PMC12823008