# Elevated circulating cell-free mitochondrial DNA in fabry disease: insights into inflammatory activation

**Authors:** Yujing Yuan, Xinyu Zhang, Yawen Zhao, Yikang Wang, Jingyi Huang, Qingqing Wang, Xueqin Song, Jianwen Deng, Zhaoxia Wang, Yun Yuan, Wei Zhang

PMC · DOI: 10.3389/fimmu.2025.1706045 · Frontiers in Immunology · 2026-01-07

## TL;DR

This study finds that elevated levels of mitochondrial DNA in the blood of Fabry disease patients may be linked to inflammation and could serve as a new diagnostic marker.

## Contribution

The study identifies elevated circulating cell-free mitochondrial DNA as a novel biomarker for Fabry disease and its potential link to inflammatory activation.

## Key findings

- Treatment-naïve Fabry disease patients have significantly higher levels of circulating cell-free mitochondrial DNA compared to healthy controls.
- Elevated mitochondrial DNA correlates with inflammatory cytokines like interleukin-17F and tumor necrosis factor-β, especially in male patients with classic Fabry disease.
- Circulating cell-free mitochondrial DNA shows strong diagnostic performance with 70% sensitivity and 91% specificity.

## Abstract

This study aimed to investigate mitochondrial dysfunction and its role in the pathogenesis of Fabry disease (FD) by analyzing circulating cell-free DNA (ccf-DNA) in patients with FD.

Sixty-six FD patients and 21 healthy controls (ctrls) were enrolled. Levels of plasma mitochondrial- (ccf-mtDNA) and nuclear-derived ccf-DNA (ccf-nDNA) were quantified by quantitative reverse-transcription PCR (RT-qPCR), and 14 inflammatory cytokines were measured in treatment-naïve patients. Associations among ccf-DNA levels, cytokine profiles, disease biomarkers, and clinical markers were analyzed, with subgroup analyses stratified by sex, genotype, clinical subtype, and disease severity.

Treatment-naïve patients exhibited significantly higher ccf-mtDNA (z=–4.530, P-adj<0.001) and mtDNA/nDNA ratio (z=–2.613, P-adj=0.014) compared with ctrls. In the long-term enzyme replacement therapy (ERT) group (> 12 months), ccf-mtDNA copy number remained elevated (z=–3.141, P-adj=0.006), whereas the mtDNA/nDNA ratio did not differ significantly (z=–1.013, P-adj=0.311). No differences in ccf-nDNA were observed between treatment-naïve patients or the long-term ERT group compared with ctrls. Receiver operating characteristic analysis demonstrated the strong diagnostic performance of ccf-mtDNA (area under the curve=0.860), with 70% sensitivity and 91% specificity at an optimal cut-off value of 1,793,188.04 copies. Both ccf-mtDNA and mtDNA/nDNA ratio correlated positively with inflammatory cytokines including interleukin-17F and tumor necrosis factor-β, with stronger associations observed in male patients with classic FD. No correlations were observed with disease duration, α-galactosidase A activity, plasma globotriaosylsphingosine or clinical markers after adjustment for age and sex. Similarly, ccf-DNA measures did not differ significantly by sex, GLA mutation type (truncated vs. non-truncated), FD subtype (classic vs. non-classic), or across subgroups defined by disease severity or organ involvement (high vs. low MSSI, with or without hypertrophic cardiomyopathy, with or without chronic kidney disease, mild vs. severe white matter lesions, with or without neuralgia, or mild vs. severe pain).

Mitochondrial dysfunction, reflected by elevated ccf-mtDNA, is implicated in FD pathogenesis and may be linked to inflammatory activation. ccf-mtDNA represents a promising diagnostic biomarker for FD, potentially offering an additional therapeutic target when combined with ERT.

## Linked entities

- **Diseases:** Fabry disease (MONDO:0010526)

## Full-text entities

- **Genes:** PITX1 (paired like homeodomain 1) [NCBI Gene 5307] {aka BFT, CCF, POTX, PTX1}, LTA (lymphotoxin alpha) [NCBI Gene 4049] {aka LT, TNFB, TNFSF1, TNLG1E}, GLA (galactosidase alpha) [NCBI Gene 2717] {aka GALA}, IL17F (interleukin 17F) [NCBI Gene 112744] {aka CANDF6, IL-17F, ML-1, ML1}
- **Diseases:** white matter lesions (MESH:D056784), FD (MESH:D000795), neuralgia (MESH:D009437), Mitochondrial dysfunction (MESH:D028361), chronic kidney disease (MESH:D051436), pain (MESH:D010146), inflammatory (MESH:D007249), hypertrophic cardiomyopathy (MESH:D002312)
- **Chemicals:** globotriaosylsphingosine (-)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

41 references — full list in the complete paper: https://tomesphere.com/paper/PMC12819586/full.md

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Source: https://tomesphere.com/paper/PMC12819586