# Process and analytical strategies for the safe production of mRNA vaccines and therapeutics

**Authors:** Cinderella J. A. Nowak, Sha Liu, Robert J. Falconer, Lukas Gerstweiler

PMC · DOI: 10.1007/s11033-026-11455-0 · Molecular Biology Reports · 2026-01-20

## TL;DR

This paper reviews strategies to improve the purity of mRNA vaccines and therapeutics during production.

## Contribution

The paper provides insights into mechanisms of impurity formation and mitigation strategies during mRNA production.

## Key findings

- Engineered T7 RNA polymerases and optimized transcription conditions can improve mRNA purity.
- Advanced analytical methods are being developed to detect and quantify mRNA impurities.
- Improved processes enable safer and more effective mRNA vaccines and therapeutics.

## Abstract

The production of high-purity mRNA drug substances by in vitro transcription utilizing T7 RNA polymerase can be challenging due to the formation of product related impurities. These include double-stranded RNA, fragmented mRNA, and uncapped transcripts. This review examines the known mechanisms underlying the formation of the major mRNA impurities during in vitro transcription (IVT), their biological impact and strategies for their mitigation. Some companies have utilised engineered T7 RNA polymerases and optimized transcription conditions to improve mRNA purity. There is a growing focus on refining upstream and downstream processes to improve mRNA purity. The current analytical approaches for impurity detection and quantification are reviewed. These range from immunological assays to advanced chromatographic and sequencing technologies. Continued innovation is needed to develop the next generation of high-throughput, cost-efficient analytical methods for quantifying mRNA impurities. Together improved transcription, purification and analysis enable the manufacture of safe efficacious mRNA for vaccines and therapeutics.

## Full-text entities

- **Genes:** IFIH1 (interferon induced with helicase C domain 1) [NCBI Gene 64135] {aka AGS7, Hlcd, IDDM19, IMD95, MDA-5, MDA5}, RIGI (RNA sensor RIG-I) [NCBI Gene 23586] {aka DDX58, RIG-I, RIG1, RLR-1, SGMRT2}
- **Diseases:** ICH (MESH:D000082122), IVT (MESH:C566179), infectious diseases (MESH:D003141), genetic disorders (MESH:D030342), COVID (MESH:D000086382), cancer (MESH:D009369), rare diseases (MESH:D035583), viral diseases (MESH:D014777), inflammatory (MESH:D007249)
- **Chemicals:** acetonitrile (MESH:C032159), IP (MESH:C041508), 5'ppp (MESH:C051161), Magnesium (MESH:D008274), poly(T) (MESH:D011071), guanine (MESH:D006147), Polyacrylamide (MESH:C016679), 5-Methylcytidine (MESH:C016568), poly(A) (MESH:D011061), fluorescein (MESH:D019793), oligonucleotide (MESH:D009841), diphosphate (MESH:D011756), histidine (MESH:D006639), Urea (MESH:D014508), pseudouridine (MESH:D011560), hydrogen (MESH:D006859), 32P (MESH:C000615311), 1-methylpseudouridine (MESH:C013608), oligo(dT (MESH:C027903), lipopolysaccharides (MESH:D008070), pyrophosphate (MESH:C107241), salt (MESH:D012492), phosphate (MESH:D010710), nucleotide (MESH:D009711), S-adenosylmethionine (MESH:D012436), formamide (MESH:C031066), Cytidine triphosphate (MESH:D003570), m7G (MESH:C016578), GTP (MESH:D006160), 5-methylcytosine (MESH:D044503), AO (MESH:D000165), Metal (MESH:D008670), Magnesium Chloride (MESH:D015636), NTPs (-), adenosine (MESH:D000241), dinucleotide (MESH:D015226), water (MESH:D014867), 6-methyladenosine (MESH:C010223), m7GpppG (MESH:C062229), methylguanosine (MESH:C116616), NaCl (MESH:D012965)
- **Species:** Orthopoxvirus vaccinia (species) [taxon 10245], Theileria sp. 7 (species) [taxon 2874162], Homo sapiens (human, species) [taxon 9606], Bacteriophage sp. (species) [taxon 38018], Escherichia coli (E. coli, species) [taxon 562]
- **Mutations:** Phe-Ala883, P266L, A-15 C, P226L, G47A

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12819531/full.md

## References

4 references — full list in the complete paper: https://tomesphere.com/paper/PMC12819531/full.md

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Source: https://tomesphere.com/paper/PMC12819531