# Mobile RNAs as systemic signaling beyond boundaries for plant stress resistance

**Authors:** Shujin Lin, Haining Li, Shiyan Bai, Xiao Han

PMC · DOI: 10.3389/fpls.2025.1712714 · Frontiers in Plant Science · 2026-01-02

## TL;DR

Mobile RNAs help plants adapt to stress by signaling across cells and species, offering new ways to improve crop resilience and sustainability.

## Contribution

The paper highlights the diverse roles and transport mechanisms of mobile RNAs in plant stress resistance and their potential for crop improvement.

## Key findings

- Mobile RNAs coordinate plant adaptation to environmental stresses across cellular and species boundaries.
- They enable epigenetic modifications, resource allocation, and cross-species communication.
- Mobile RNAs are being used to develop RNAi-based biopesticides and CRISPR-Cas genome editing in crops.

## Abstract

Plant mobile RNAs—including small RNAs (miRNAs, siRNAs), mRNAs, lncRNAs, and tRNA fragments—function as systemic signaling molecules that traverse cellular, tissue, and species boundaries to coordinate plant adaptation to environmental stresses. Here, we summarize the critical roles of mobile RNAs in mediating systemic adaptation to abiotic challenges and biotic interactions. Crucially, we highlight the diverse transport mechanisms enabling their movement and discuss the emerging functional versatility of mobile RNAs, which extends beyond transcriptional regulation to encompass epigenetic modifications, resource allocation, and cross-species communication. These fundamental insights are driving transformative applications: Mobile RNAs provide the foundation for developing systemic RNAi-based biopesticides and are being integrated with CRISPR-Cas technologies to overcome delivery barriers and enable heritable, transgene-free genome editing in crops. Understanding and harnessing mobile RNA networks offers unprecedented potential for engineering resilient crops and implementing precise, sustainable crop protection strategies to address global food security challenges.

## Full-text entities

- **Genes:** ACT12 (actin-12) [NCBI Gene 823805] {aka ACTIN, actin-12}, BIK1 (botrytis-induced kinase1) [NCBI Gene 818549] {aka F12L6.32, F12L6_32, botrytis-induced kinase1}, SGS3 (XS domain-containing protein / XS zinc finger domain-containing protein-like protein) [NCBI Gene 832422] {aka ATSGS3, MQM1.17, MQM1_17, SUPPRESSOR OF GENE SILENCING 3}, TIR1 (F-box/RNI-like superfamily protein) [NCBI Gene 825473] {aka AtTIR1, TRANSPORT INHIBITOR RESPONSE 1}, AFB3 (auxin signaling F-box 3) [NCBI Gene 837838] {aka F13K23.7, F13K23_7, auxin signaling F-box 3}, DGD2 (digalactosyl diacylglycerol deficient 2) [NCBI Gene 827960] {aka DIGALACTOSYLDIACYLGLYCEROL SYNTHASE, F6N23.24, F6N23_24, digalactosyl diacylglycerol deficient 2}, MIR395a (ncRNA) [NCBI Gene 5007727] {aka MICRORNA 395, MIR395, microRNA395A, p_MI0001007}, SERK2 (somatic embryogenesis receptor-like kinase 2) [NCBI Gene 840320] {aka ATSERK2, F23M19.11, F23M19_11, somatic embryogenesis receptor-like kinase 2}, XI-I (myosin) [NCBI Gene 829456] {aka ATXI-I, F4I10.130, F4I10_130, MYOSIN XI I, MYOSIN XI-15, XI-15}, ABF2 (abscisic acid responsive elements-binding factor 2) [NCBI Gene 841095] {aka ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2, AREB1, ATAREB1, AtABF2, abscisic acid responsive elements-binding factor 2}, tRNA [NCBI Gene 11542014], GRP7 (cold, circadian rhythm, and rna binding 2) [NCBI Gene 816705] {aka ''cold, ATGPR7, ATGRP7, CCR2, F2G1.4, GLYCINE RICH PROTEIN 7}, AGO1 (Stabilizer of iron transporter SufD / Polynucleotidyl transferase) [NCBI Gene 841262] {aka ARGONAUTE 1, AtAGO1, ICU9, T1N15.2, T1N15_2}, STM [NCBI Gene 107759204], HMG1 (hydroxy methylglutaryl CoA reductase 1) [NCBI Gene 843982] {aka 3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE, 3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE 1, AtHMGR1, F15M4.1, HMG-COA REDUCTASE, HMGR1}, AGO2 (Argonaute family protein) [NCBI Gene 840016] {aka AtAGO2, T19E23.7, T19E23_7, argonaute 2}, CK1 (choline kinase 1) [NCBI Gene 843500] {aka ATCK1, CHOLINE KINASE, CK, F14O23.8, F14O23_8, choline kinase 1}, NIA1 [NCBI Gene 106400358], FT (PEBP (phosphatidylethanolamine-binding protein) family protein) [NCBI Gene 842859] {aka F5I14.3, F5I14_3, FLOWERING LOCUS T, REDUCED STEM BRANCHING 8, RSB8}, HSFB4 (heat shock transcription factor B4) [NCBI Gene 841110] {aka AT-HSFB4, F2G19.8, F2G19_8, SCHIZORIZA, SCZ, heat shock transcription factor  B4}, SUC2 (sucrose-proton symporter 2) [NCBI Gene 838877] {aka ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 2, ATSUC2, SUCROSE TRANSPORTER 1, SUCROSE-H+ SYMPORTER, SUT1, T22J18.12}
- **Diseases:** leaf yellowing (MESH:C537729), Fungal (MESH:D009181), Drought (MESH:C536747), toxicity (MESH:D064420), infection (MESH:D007239), HL (MESH:C538324)
- **Chemicals:** lipid (MESH:D008055), lignins (MESH:D008031), phenylpropane (MESH:C024268), calcium (MESH:D002118), sphingolipids (MESH:D013107), H+ (MESH:D006859), cadmium (MESH:D002104), K+ (MESH:D011188), Na+ (MESH:D012964), 2-oxocarboxylic acid (-), sulfur (MESH:D013455), PC (MESH:C053518), fatty acid (MESH:D005227), thiol (MESH:D013438), lignans (MESH:D017705), amino acid (MESH:D000596), iron (MESH:D007501), BABA (MESH:C047667), cholesterol (MESH:D002784), copper (MESH:D003300), sugars (MESH:D000073893), phosphorus (MESH:D010758), phosphate (MESH:D010710), Salt (MESH:D012492), glycerophospholipid (MESH:D020404), zinc (MESH:D015032), metal (MESH:D008670), chlorophyll (MESH:D002734), carbon (MESH:D002244), nitrogen (MESH:D009584)
- **Species:** Nicotiana benthamiana (species) [taxon 4100], Medicago truncatula (barrel medic, species) [taxon 3880], Pyrus betulifolia (species) [taxon 436086], Apis mellifera (bee, species) [taxon 7460], C. australis [taxon 54191], Botrytis cinerea (gray fruit mold, species) [taxon 40559], Foxtail mosaic virus (no rank) [taxon 12179], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Rhizobium (genus) [taxon 379], Solanum lycopersicum (tomato, species) [taxon 4081], Brassica napus (oilseed rape, species) [taxon 3708], Cytorhabdovirus hordei (no rank) [taxon 1985699], Pyrus (pears, genus) [taxon 3766], Tomato yellow leaf curl virus (no rank) [taxon 10832], Turnip crinkle virus (no rank) [taxon 11988], Thanatephorus sp. RV (species) [taxon 359004], Cuscuta campestris (field dodder, species) [taxon 132261], Potato virus X (no rank) [taxon 12183], Citrus (genus) [taxon 2706], Malus domestica (apple, species) [taxon 3750], Bradyrhizobium japonicum (species) [taxon 375], Glycine max (soybean, species) [taxon 3847], Cucumber mosaic virus (cucumber mosaic cucumovirus, no rank) [taxon 12305], Rhizophagus irregularis (species) [taxon 588596], Barley stripe mosaic virus (no rank) [taxon 12327], Pyrus communis (pear, species) [taxon 23211], Tobacco rattle virus (no rank) [taxon 12295], Verticillium dahliae (species) [taxon 27337]

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12808457/full.md

## References

101 references — full list in the complete paper: https://tomesphere.com/paper/PMC12808457/full.md

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Source: https://tomesphere.com/paper/PMC12808457