# Triple base editor catalyzes saturation mutation of adenine, cytidine, and guanine

**Authors:** Youming Wu, Jinxin Wang, Ziyi Zhang, Mengyu Shang, Shuping Wang, Yinuo Li, Guangyu Li, Shuangshuang Lu, Kaiyuan Ji, Xiaoyue Wang, Xiaohui Zhang

PMC · DOI: 10.1093/nar/gkaf1423 · Nucleic Acids Research · 2026-01-14

## TL;DR

Scientists created a new base editor that can efficiently mutate three DNA bases, enabling broader genetic screening and therapeutic applications.

## Contribution

The development of a triple base editor (ACG-BEs) that enables saturation mutagenesis across adenine, cytosine, and guanine.

## Key findings

- ACG-BEs achieved up to 80.5% conversion efficiency for A-to-G/C/T in HEK293T cells.
- The editor enabled identification of novel mutations in the HBG1/2 promoter region for γ-globin activation.
- ACG-BEs offer enhanced DNA sequence diversity for genetic screening and therapeutic strategies.

## Abstract

Current base editors act on a maximum of two base substrates and generate limited base conversions or transversions, hindering their applicability for inducing DNA sequence diversity. Here, we engineered a triple base editor (named ACG-BEs) using a fusion of adenine base editor with high A/C catalytic activity and evolved N-methylpurine DNA glycosylase. ACG-BEs enables efficient, multiplexed saturation mutagenesis across adenine (A), cytosine (C), and guanine (G), achieving conversion efficiencies of up to 80.5% for A-to-G/C/T, 75.8% for C-to-T/G/A, and 63.4% for G-to-C/T/A in HEK293T cells. Leveraging ACG-BEs, we identify novel mutations in the HBG1/2 promoter region that confer efficient activation of γ-globin expression in HUDEP-2 cells—a promising advancement for therapeutic strategies targeting hemoglobinopathies. These findings highlight ACG-BEs as a cutting-edge platform for multiplexed saturation mutagenesis, offering broad applications in genetic screening and therapeutic base mutation introduction through enhanced DNA sequence diversity.

Graphical Abstract

## Linked entities

- **Genes:** HBG1 (hemoglobin subunit gamma 1) [NCBI Gene 3047], HBG2 (hemoglobin subunit gamma 2) [NCBI Gene 3048]

## Full-text entities

- **Genes:** MPG (N-methylpurine DNA glycosylase) [NCBI Gene 4350] {aka AAG, ADPG, APNG, CRA36.1, MDG, PIG11}, HBG1 (hemoglobin subunit gamma 1) [NCBI Gene 3047] {aka HBG-T2, HBGA, HBGR, HSGGL1, PRO2979}
- **Diseases:** hemoglobinopathies (MESH:D006453)
- **Chemicals:** ACG-BEs (-), cytosine (MESH:D003596), adenine (MESH:D000225)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12802905/full.md

## References

31 references — full list in the complete paper: https://tomesphere.com/paper/PMC12802905/full.md

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Source: https://tomesphere.com/paper/PMC12802905