# Diagnostic oral microbiota signatures for gastric cancer and associations with carcinogenic signaling pathways

**Authors:** Yeon-Hee Kim, Il Ju Choi, Keun Won Ryu, Young-Il Kim, Zeba Praveen, Mi Kyung Kim

PMC · DOI: 10.1080/20002297.2026.2613531 · Journal of Oral Microbiology · 2026-01-11

## TL;DR

This study shows that specific oral bacteria in saliva can accurately detect early-stage gastric cancer, offering a non-invasive diagnostic tool.

## Contribution

The study identifies novel oral microbial markers for gastric cancer and links them to known cancer-related signaling pathways.

## Key findings

- Eight oral genera, including Ralstonia and Megasphaera, were validated as diagnostic markers with high accuracy (AUC = 0.91).
- Certain genera like Lautropia were associated with reduced gastric cancer risk.
- The model effectively detects early-stage and tumor-marker–negative gastric cancer.

## Abstract

Gastric cancer (GC) is a major cause of cancer mortality worldwide. We evaluated whether oral microbiota could be sensitive, specific, and non-invasive markers for early GC detection.

Saliva samples were analyzed using 16S rRNA sequencing, and oral microbial markers were validated using an internal validation dataset. Machine learning was used to identify key genera, and functional associations were inferred using Kyoto Encyclopedia of Genes and Genomes pathway and ortholog analyses. Blood samples were also collected, and plasma cytokines were quantified by enzyme-linked immunosorbent assay (ELISA) for pathway-level interpretations.

Eight genera—Lautropia, Megasphaera, Ralstonia, Pseudomonas, Peptostreptococcus, Anaerovorax, Fusobacterium, and Neisseria—were validated as diagnostic microbial markers (area under the receiver operating characteristic curve [AUC] = 0.91). Megasphaera and Ralstonia were enriched in GC, whereas Lautropia was depleted and associated with reduced risk. These genera may be functionally linked to pathways involved in GC progression, including NF-κB, IL-6, STAT3, TGF-β1, and Smad2/3. The proposed classification method effectively identified early-stage and tumor-marker–negative GCs, underscoring its clinical translation potential.

Oral microbial markers, including Ralstonia, Megasphaera, and Lautropia, may serve as non-invasive diagnostic markers for GC and may be related to carcinogenic signaling activity.

Oral microbiota profiles in saliva can serve as highly accurate, non-invasive diagnostic markers for gastric cancer.Specific taxa, including Ralstonia, Megasphaera, and Lautropia, appear to be associated with gastric cancer and related to carcinogenic signaling pathways.The diagnostic model effectively detects early-stage and tumor-marker–negative gastric cancer, supporting its clinical utility.

Oral microbiota profiles in saliva can serve as highly accurate, non-invasive diagnostic markers for gastric cancer.

Specific taxa, including Ralstonia, Megasphaera, and Lautropia, appear to be associated with gastric cancer and related to carcinogenic signaling pathways.

The diagnostic model effectively detects early-stage and tumor-marker–negative gastric cancer, supporting its clinical utility.

## Linked entities

- **Proteins:** NFKB1 (nuclear factor kappa B subunit 1), IL6 (interleukin 6), STAT3 (signal transducer and activator of transcription 3), TGFB1 (transforming growth factor beta 1), Smad2/3 (Smad2/3 transcription factor)
- **Diseases:** gastric cancer (MONDO:0001056)

## Full-text entities

- **Genes:** IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774] {aka ADMIO, ADMIO1, APRF, HIES}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}
- **Diseases:** cancer (MESH:D009369), GC (MESH:D013274), carcinogenic (MESH:D011230)
- **Species:** Peptostreptococcus (genus) [taxon 1257], Neisseria (genus) [taxon 482], Fusobacterium (genus) [taxon 848], Anaerovorax (genus) [taxon 109326], Pseudomonas (RNA similarity group I, genus) [taxon 286], Ralstonia (genus) [taxon 48736]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12794691/full.md

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12794691/full.md

## References

55 references — full list in the complete paper: https://tomesphere.com/paper/PMC12794691/full.md

---
Source: https://tomesphere.com/paper/PMC12794691