# P-1717. Temporal-spatial contributions of Candida albicans environmental response genes to pathogenesis of intra-abdominal candidiasis (IAC)

**Authors:** Shaoji Cheng, M Hong Nguyen, Cornelius J Clancy

PMC · DOI: 10.1093/ofid/ofaf695.1888 · Open Forum Infectious Diseases · 2026-01-11

## TL;DR

This study identifies Candida albicans genes involved in causing intra-abdominal candidiasis, focusing on how environmental response genes contribute to infection at different stages.

## Contribution

The study reveals new temporal-spatial roles of C. albicans environmental response genes in intra-abdominal candidiasis pathogenesis.

## Key findings

- Genes related to pH, oxidative stress, adhesion, and hyphal growth are active during early peritonitis.
- Late peritonitis involves genes for phagocyte responses and nutrient acquisition.
- Key regulators like RIM101 and MNL1 contribute to virulence by controlling SAP5 and PHO4/SKO1.

## Abstract

IAC, which includes peritonitis and intra-abdominal abscesses (IAAs), is the second most common type of invasive candidiasis, but its pathogenesis is poorly understood.Table 1.C. albicans biologic processes activated during IAC.Figure 1.C. ablicans transcription factor mutants attenuated during IAC.

C. albicans biologic processes activated during IAC.

C. ablicans transcription factor mutants attenuated during IAC.

We used RNA-Seq to measure C. albicans SC5314 gene expression during early peritonitis (30-min), late peritonitis (24-hr) IAA (48-hr) of mice. ≥2-fold differences were significant (false discovery ≤0.01). We screened duplicate signature-tagged, homozygous deletion libraries for 165 C. albicans transcription factors (TFs) in 72-hr IAA.Figure 2.C. albicans weak acid response genes contributing to IAC.Figure 3.Over-expression of PHO4 or SKO1 in mnl1 rescues weak acid responses.

C. albicans weak acid response genes contributing to IAC.

Over-expression of PHO4 or SKO1 in mnl1 rescues weak acid responses.

The 50 genes most highly expressed during early peritonitis were associated with pH (e.g., RIM101, PHR1), oxidative stress responses (e.g., SOD4-6), and adhesion/hyphal growth (e.g., ALS3, HWP1, ECM331, SAP6). The corresponding 50 late peritonitis genes were associated with phagocyte responses and nutrient acquisition (glyoxylate cycle, fatty acid β-oxidation, iron homeostasis). Responses within IAA included DNA damage and iron metabolism. Null mutants for genes involved in adhesion (ALS1, ALS3), transport (OPT8, SGE11), biofilm (ZCF23), DNA damage responses (RFX1, RFX2, DDI1), cell wall responses (DAP2) and copper metabolism (CCC2) were attenuated during peritonitis and/or IAA [Table 1]. 21 TF mutants were significantly attenuated for virulence in both libraries [Fig 1]. Biologic processes over-represented were regulation of pH responses, biofilm, hyphal formation, echinocandin responses, and copper metabolism. 9 pH response regulators were confirmed to contributed to virulence, including RIM101, STP2 (alkaline), ASH1, SFL1, SFL2 (neutral), MNL1, SKO1, PHO4 (weak acid), and CSR1 (acid) [Fig 2]. Over-expression of aspartyl protease SAP5 in rim101 restored virulence during IAA at 3, 7, and 10 days. Over-expression of either SKO1 or PHO4 in mnl1 restored weak acid responses in vitro [Fig 3] and virulence (not shown).

Numerous C. albicans environmental response genes make temporal-spatial contributions to IAC. pH response regulators RIM101 and MNL1 contribute to virulence during peritonitis and IAA, in part by regulating SAP5 and PHO4/SKO1, respectively. Other processes and genes involved in IAC pathogeneses are adhesion, transport, biofilm, DNA damage responses, cell wall responses and copper metabolism.

M Hong Nguyen, MD, Basilea: Advisor/Consultant|BioMerieux: Grant/Research Support|Melinta: Grant/Research Support|Pulmocide: Advisor/Consultant|Pulmocide: Grant/Research Support Cornelius J. Clancy, MD, Merck: Grant/Research Support|Shionogi: Advisor/Consultant

## Linked entities

- **Genes:** RIM101 (alkaline-responsive transcriptional regulator RIM101) [NCBI Gene 856358], MYCBP2 (MYC binding protein 2) [NCBI Gene 23077], sod-4 (Extracellular superoxide dismutase;Superoxide dismutase) [NCBI Gene 176336], ALS3 (amyotrophic lateral sclerosis 3 (autosomal dominant)) [NCBI Gene 253], HWP1 (adhesin factor HWP1) [NCBI Gene 3645372], ECM331 (Ecm331p) [NCBI Gene 2905561], SAP6 (aspartyl protease SAP6) [NCBI Gene 3639229], RFX1 (regulatory factor X1) [NCBI Gene 5989], RFX2 (regulatory factor X2) [NCBI Gene 5990], DDI1 (DDI proteasomal shuttling factor 1) [NCBI Gene 414301], OPT8 (oligopeptide transporter 8) [NCBI Gene 835434], SGE1.1 (suppressor of gal11 null) [NCBI Gene 4837958], ZCF23 (Zcf23p) [NCBI Gene 2903685], DLGAP2 (DLG associated protein 2) [NCBI Gene 9228], SLC12A1 (solute carrier family 12 member 1) [NCBI Gene 6557], SULT1A2 (sulfotransferase family 1A member 2) [NCBI Gene 6799], ASCL1 (achaete-scute family bHLH transcription factor 1) [NCBI Gene 429], SFL1 (Sfl1p) [NCBI Gene 854307], SFL2 (Sfl2p) [NCBI Gene 2905388], MNL1 (alpha-1,2-mannosidase MNL1) [NCBI Gene 856611], SKO1 (Sko1p) [NCBI Gene 855554], pho-4 (intestinal acid PHOsphatase) [NCBI Gene 173897], SCARA3 (scavenger receptor class A member 3) [NCBI Gene 51435], SAP5 (A20/AN1-like zinc finger family protein) [NCBI Gene 820443]
- **Diseases:** peritonitis (MONDO:1010128)
- **Species:** Candida albicans (taxon 5476), Mus musculus (taxon 10090)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12793367/full.md

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Source: https://tomesphere.com/paper/PMC12793367