# Integrated Mendelian Randomization and Single‐Cell RNA Sequencing Analyses Reveal Lactate Metabolism as a Key Pathway in COVID‐19‐Induced Pulmonary Fibrosis

**Authors:** Xin Zhang, Liping Jia, Tuersun Yeziya, Shuyan Yang, Miaomiao Chen, Yan Mo, Xia Tong, Lanlan Zhang

PMC · DOI: 10.1155/carj/1049336 · Canadian Respiratory Journal · 2026-01-11

## TL;DR

This study finds that lactate metabolism in lung cells plays a key role in how COVID-19 causes lung scarring, suggesting new treatment targets.

## Contribution

The novel integration of Mendelian randomization and single-cell RNA sequencing reveals lactate metabolism as a causal pathway in COVID-19-induced pulmonary fibrosis.

## Key findings

- Mendelian randomization analysis shows a significant causal link between COVID-19 and idiopathic pulmonary fibrosis (OR = 1.15).
- Lactate metabolism, mediated by SLC16A4, is a key pathway in the progression of fibrosis in lung epithelial cells.
- Cellular interaction analysis identifies PDGFC–PDGFRA signaling between epithelial cells and fibroblasts as a driver of fibrosis.

## Abstract

The COVID‐19 pandemic has led to a variety of long‐term complications, with COVID‐19‐induced idiopathic pulmonary fibrosis (IPF) becoming a major concern. However, the underlying mechanisms, effective therapeutic strategies, and long‐term prognosis of COVID‐19‐related pulmonary fibrosis remain unclear.

This study utilized Mendelian randomization (MR) analysis and single‐cell RNA sequencing (scRNA‐seq) to systematically investigate the molecular mechanisms underlying COVID‐19‐induced pulmonary fibrosis. MR analysis was conducted to assess causal relationships, while scRNA‐seq provided detailed insights into the cellular and molecular processes involved in fibrosis.

MR analysis revealed a significant association between COVID‐19 infection and the development of IPF (OR = 1.15, 95% CI = 1.05–1.25, p = 0.001), whereas the reverse causality—IPF increasing the risk of COVID‐19 infection—was not significant. Mediation analysis identified lactate metabolism as a crucial intermediary pathway in COVID‐19‐induced IPF (OR = 1.30, 95% CI = 1.09–1.55, p = 0.003). scRNA‐seq confirmed the central role of lactate metabolism in pulmonary fibrosis, particularly in lung epithelial cells. The key lactate transport gene, SLC16A4, was found to play a significant role in the progression of fibrosis. Additionally, cellular interaction analysis revealed that lung epithelial cells interacted with fibroblasts via the PDGFC–PDGFRA signaling axis, promoting fibrosis.

This study uncovers a critical mechanism by which COVID‐19 promotes pulmonary fibrosis through the regulation of lactate metabolism in lung epithelial cells, with SLC16A4 playing a pivotal role. These findings highlight the potential of targeting this metabolic pathway as a therapeutic approach for pulmonary fibrosis, offering new directions for future antifibrotic treatment strategies.

## Linked entities

- **Genes:** SLC16A4 (solute carrier family 16 member 4) [NCBI Gene 9122]
- **Proteins:** PDGFC (platelet derived growth factor C), PDGFRA (platelet derived growth factor receptor alpha)
- **Diseases:** COVID-19 (MONDO:0100096), idiopathic pulmonary fibrosis (MONDO:0800029), pulmonary fibrosis (MONDO:0002771)

## Full-text entities

- **Genes:** PDGFC (platelet derived growth factor C) [NCBI Gene 56034] {aka FALLOTEIN, SCDGF}, SLC16A4 (solute carrier family 16 member 4) [NCBI Gene 9122] {aka MCT4, MCT5}, PDGFRA (platelet derived growth factor receptor alpha) [NCBI Gene 5156] {aka CD140A, PDGFR-2, PDGFR2}
- **Diseases:** IPF (MESH:D054990), Pulmonary Fibrosis (MESH:D011658), fibrosis (MESH:D005355), COVID-19 (MESH:D000086382)
- **Chemicals:** Lactate (MESH:D019344)

## Full text

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## Figures

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## References

35 references — full list in the complete paper: https://tomesphere.com/paper/PMC12791023/full.md

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Source: https://tomesphere.com/paper/PMC12791023