# MicroRNA156 and its targeted SPL genes interact with the photoperiod, vernalization, and gibberellin pathways to regulate wheat heading time

**Authors:** Qiujie Liu, Lili Zhang, Zhicheng Zhou, Chaozhong Zhang, Chengxia Li, Juan M. Debernardi, Jorge Dubcovsky

PMC · DOI: 10.1111/tpj.70656 · The Plant Journal · 2026-01-11

## TL;DR

This study shows how microRNA156 and SPL genes interact with other pathways to control wheat heading time, offering new tools to improve wheat adaptation.

## Contribution

The paper introduces new dominant miR156-resistant SPL alleles that accelerate wheat heading time under various conditions.

## Key findings

- Reduced miR156 or increased SPL gene expression leads to earlier wheat heading time.
- SPL proteins interact with DELLA and SQUAMOSA proteins to regulate flowering pathways.
- Dominant rSPL alleles accelerate heading time and are available for public use.

## Abstract

Heading time has a large impact on adaptation to different environments and crop productivity. In this study, we characterized the effect of the endogenous age pathway on heading time and its interactions with the photoperiod and vernalization pathways in the leaves of tetraploid wheat (Triticum turgidum ssp. durum). Plants with reduced levels of microRNA156 or increased expression of its downstream targets, the SQUAMOSA PROMOTER BINDING PROTEIN‐LIKE genes SPL3, SPL4, and SPL13 exhibited accelerated heading time, with stronger effects under suboptimal inductive conditions. Earlier heading was associated with the upregulation of miR172 and flowering‐promoting genes VRN1, FUL2, and FT1 and the downregulation of flowering‐repressing genes AP2L1 and VRN2. Additionally, we uncovered complex interactions among SPL, SQUAMOSA (VRN1 and FUL2), and DELLA proteins that modulate wheat heading time. We showed that DELLA proteins, which are negative regulators in the gibberellic acid pathway, can interact with SPL proteins reducing their ability to induce flowering. We also discovered previously unknown interactions between SQUAMOSA and DELLA proteins in wheat that compete with the DELLA‐SPL interactions, likely reducing DELLA's ability to repress SPL3 and SPL4 activity. Since SPL3 and SPL4 directly promote VRN1 and FUL2 transcription, these interactions generate a positive regulatory feedback loop that accelerates wheat heading time. Finally, we developed dominant miR156‐resistant alleles rSPL3, rSPL4, and rSPL13 that accelerate wheat heading time under both optimal and suboptimal inductive conditions. These publicly available genetic resources can be used to fine‐tune heading time and improve wheat adaptation to changing environments.

Wheat heading time is critical for adaptation to diverse environments. We generated dominant mutations for the SPL3, SPL4, and SPL13 genes that accelerate heading time. Different combinations of these mutations can be used to modulate heading time and improve wheat adaptation to changing environments.

## Linked entities

- **Genes:** spl-3 (sphinganine-1-phosphate aldolase) [NCBI Gene 190868], SPL4 (squamosa promoter binding protein-like 4) [NCBI Gene 841749], SPL13A (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein) [NCBI Gene 835126], mir17-2 (microRNA mir-17-2) [NCBI Gene 102464280], VRN1 (AP2/B3-like transcriptional factor family protein) [NCBI Gene 821432], FUL2 (transcription factor FRUITFULL) [NCBI Gene 543887], AKTIP (AKT interacting protein) [NCBI Gene 64400], LOC543360 (APETALA2-like protein 2) [NCBI Gene 543360], VRN2 (VEFS-Box of polycomb protein) [NCBI Gene 827392]
- **Chemicals:** gibberellic acid (PubChem CID 6466)

## Full-text entities

- **Chemicals:** gibberellic acid (MESH:C007842), gibberellin (MESH:D005875), miR156 (-)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12790879/full.md

## References

63 references — full list in the complete paper: https://tomesphere.com/paper/PMC12790879/full.md

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Source: https://tomesphere.com/paper/PMC12790879