# UBC9 mediates mitophagy to attenuate oxidative stress by regulating SUMOylation of PINK1 in the Parkinson’s disease progression

**Authors:** Jian Liu, Ge Jia, Yu Zhou, Junmei Zhang, Yanjin Wang, Yuxiang Cai

PMC · DOI: 10.1007/s10565-025-10126-3 · Cell Biology and Toxicology · 2025-12-06

## TL;DR

UBC9 helps protect brain cells in Parkinson’s disease by modifying PINK1, reducing oxidative stress and improving cell survival.

## Contribution

UBC9 is shown to regulate PINK1 SUMOylation, promoting mitophagy and reducing neurodegeneration in Parkinson’s disease models.

## Key findings

- UBC9 overexpression reduces MPP+-induced cell death and oxidative stress in SH-SY5Y cells.
- UBC9 promotes PINK1 SUMOylation at K522 and K363, stabilizing PINK1 and enhancing mitophagy.
- UBC9 alleviates motor deficits and mitochondrial dysfunction in MPTP-treated mice via PINK1.

## Abstract

Parkinson’s disease (PD) is a neurodegenerative disease characterized by progressive loss of dopaminergic neurons. UBC9 is related to the formation of several cancers. Nevertheless, the function of UBC9 in PD and the potential mechanisms are vague.

MPP⁺-induced SH-SY5Y cells and MPTP-treated C57BL/6 mice were applied to induce PD models. Cell viability, proliferation and apoptosis were measured using CCK-8, EdU and Annexin V/PI staining, respectively. JC-1 staining and fluorescent probes DCFH-DA were employed to measure mitochondrial membrane potential and ROS production. The SOD, GSH and MDA content were determined by the commercially kits. SUMOylation of PINK1 were predicted by SUMOplot and verified by co-IP/Western blot. Mitophagy-related proteins, SUMO enzymes, and TH were analyzed by qRT-PCR/Western blot. LC3 expression was detected via immunofluorescence staining. Transmission electron microscopy was performed to detect autophagy. MPTP-induced brain injury was evaluated using Nissl staining, IHC and TUNEL assay. Motor function was observed via open field test and pole test.

PINK1 and UBC9 were low-expressed in MPP+-induced SH-SY5Y cells. UBC9 mediated PINK1 SUMOylation. UBC9 overexpression promoted cell viability and reduced cells apoptosis in MPP+-stimulated SH-SY5Y cells, which was reversed after PINK1 silence or CsA treatment. Moreover, UBC9 overexpression counteracted MPP+-induced mitophagy, and oxidative stress. However, these findings were reversed by CsA or PINK1 silencing. PINK1 bound SUMO1 at the K522, K363 and K193 sites, further regulating cells viability and apoptosis. In MPTP-treated mice, UBC9 overexpression alleviated mitochondrial dysfunction and motor deficits via PINK1 SUMOylation.

UBC9 mediated mitophagy to attenuate MPP+/MPTP-induced neurotoxicity and oxidative stress by regulating PINK1 SUMOylation, suggesting that UBC9 may play a preventive role in PD progression.

UBC9 enhanced PINK1 stability by promoting SUMOylation of PINK1 at the K522R/K363R position.UBC9 regulated MPP+-induced SH-SY5Y cells proliferation and apoptosis via PINK1.UBC9 alleviated MPTP-induced motor dysfunction and oxidative stress via PINK1-mediated mitophagy.

UBC9 enhanced PINK1 stability by promoting SUMOylation of PINK1 at the K522R/K363R position.

UBC9 regulated MPP+-induced SH-SY5Y cells proliferation and apoptosis via PINK1.

UBC9 alleviated MPTP-induced motor dysfunction and oxidative stress via PINK1-mediated mitophagy.

## Linked entities

- **Genes:** UBE2I (ubiquitin conjugating enzyme E2 I) [NCBI Gene 7329], PINK1 (PTEN induced kinase 1) [NCBI Gene 65018]
- **Proteins:** PINK1 (PTEN induced kinase 1)
- **Chemicals:** MPP+ (PubChem CID 39484), CsA (PubChem CID 18462)
- **Diseases:** Parkinson’s disease (MONDO:0005180)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** SUMO1 (small ubiquitin like modifier 1) [NCBI Gene 7341] {aka DAP1, GMP1, OFC10, PIC1, SMT3, SMT3C}, ANXA5 (annexin A5) [NCBI Gene 308] {aka ANX5, CPB-I, ENX2, HEL-S-7, PP4, RPRGL3}, SOD1 (superoxide dismutase 1) [NCBI Gene 6647] {aka ALS, ALS1, HEL-S-44, IPOA, SOD, STAHP}, PINK1 (PTEN induced kinase 1) [NCBI Gene 65018] {aka BRPK, PARK6}, UBE2I (ubiquitin conjugating enzyme E2 I) [NCBI Gene 7329] {aka C358B7.1, P18, UBC9}, MAP1LC3A (microtubule associated protein 1 light chain 3 alpha) [NCBI Gene 84557] {aka ATG8E, LC3, LC3A, MAP1ALC3, MAP1BLC3}
- **Diseases:** cancers (MESH:D009369), brain injury (MESH:D001930), PD (MESH:D010300), neurotoxicity (MESH:D020258), motor deficits (MESH:D009461), mitochondrial dysfunction (MESH:D028361), neurodegenerative disease (MESH:D019636)
- **Chemicals:** PI (MESH:D010716), CCK-8 (MESH:D012844), MPTP (MESH:D015632), MDA (MESH:D015104), ROS (-), GSH (MESH:D005978), DCFH-DA (MESH:C029569), CsA (MESH:D016572), JC-1 (MESH:C068624), EdU (MESH:C022811)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** SH-SY5Y — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_0019), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU)

## Full text

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## Figures

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Source: https://tomesphere.com/paper/PMC12789204