# Endometriosis: From Genes to Global Burden

**Authors:** Pawel Kordowitzki, Liam P. Kelley, Sylvia Mechsner

PMC · DOI: 10.3390/ijms27010151 · International Journal of Molecular Sciences · 2025-12-23

## TL;DR

This paper explores the global impact of endometriosis and identifies genetic markers linked to pain and mental health issues in affected women.

## Contribution

The study combines global disease burden data with gene expression analysis to highlight the systemic and genetic complexity of endometriosis.

## Key findings

- Endometriosis is associated with high disability rates, particularly from anxiety and depression.
- Genes like FOS and SIRT1 are upregulated, while KIF22 and GAS2L2 are downregulated in endometriosis tissues.
- Pain-related genes such as NGF and GDAP1 are identified, supporting the biological basis for chronic pain in endometriosis.

## Abstract

Endometriosis has a significant impact on the social, psychological, psychosomatic, and physical aspects of women’s lives. There is increasing evidence that endometriosis has to be seen as a systemic and complex disorder with a multifactorial etiology, accompanied by numerous other pathologies, such as mental disorders and even cancer. Herein, we analyzed Disability-Adjusted Life Years (DALYs) and Years Lived with Disability (YLDs) generated from the Global Burden of Disease Study (GBD 2021), which are key metrics used to measure the worldwide impact of diseases. Besides, differential gene expression data generated from the Turku Endomet Database were calculated. Briefly, log2-transformed gene expression counts were investigated using linear modeling with the function expression ~ condition to generate log2 fold changes and p-values for each gene. This enabled a precise comparative analysis of mRNA expression levels between control endometrium and various endometriosis-affected tissues, including ovarian endometrioma, peritoneal lesions, and deep endometriosis. Expression patterns of specific genes related to pain and malignant turnover within endometriosis samples and controls have been analyzed. The identification of upregulated genes like FOS, DES, SIRT1, SBDS, SRF, SPN, P2RX1, TEAD3, and SLITRK3, alongside downregulated genes such as KIF22, KIF25, GAS2L2, and HINT3, highlights a broad transcriptional reprogramming within endometriotic tissues. The clustering analysis, which reveals pain-related genes (SRP14/BMF, GDAP1, MLLT10, BSN, and NGF), further solidifies the genetic basis for the chronic and often debilitating pain experienced by patients with endometriosis. In 2021, women with endometriosis experienced the highest rates of total YLDs at 19.98%, with anxiety contributing 17.21% and major depression 8.12%, equating to mean YLDs of 15–24 years. In conclusion, our findings reinforce the need for adopting a holistic, psychosomatic approach to managing endometriosis. The identified genetic markers related to pain provide a biological basis for the profound physical suffering. At the same time, the robust DALYs and YLDs data quantify the devastating impact on mental health, particularly highlighting the significant burden of depression and anxiety.

## Linked entities

- **Genes:** FOS (Fos proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 2353], DES (desmin) [NCBI Gene 1674], SIRT1 (sirtuin 1) [NCBI Gene 23411], SBDS (SBDS ribosome maturation factor) [NCBI Gene 51119], SRF (serum response factor) [NCBI Gene 6722], SPN (sialophorin) [NCBI Gene 6693], P2RX1 (purinergic receptor P2X 1) [NCBI Gene 5023], TEAD3 (TEA domain transcription factor 3) [NCBI Gene 7005], SLITRK3 (SLIT and NTRK like family member 3) [NCBI Gene 22865], KIF22 (kinesin family member 22) [NCBI Gene 3835], KIF25 (kinesin family member 25) [NCBI Gene 3834], GAS2L2 (growth arrest specific 2 like 2) [NCBI Gene 246176], HINT3 (histidine triad nucleotide binding protein 3) [NCBI Gene 135114], GDAP1 (ganglioside induced differentiation associated protein 1) [NCBI Gene 54332], MLLT10 (MLLT10 histone lysine methyltransferase DOT1L cofactor) [NCBI Gene 8028], BSN (bassoon presynaptic cytomatrix protein) [NCBI Gene 8927], NGF (nerve growth factor) [NCBI Gene 4803]
- **Diseases:** endometriosis (MONDO:0005133), anxiety (MONDO:0005618), major depression (MONDO:0002009)

## Full-text entities

- **Genes:** GDAP1 (ganglioside induced differentiation associated protein 1) [NCBI Gene 54332] {aka CMT4, CMT4A, CMTRIA}, SRF (serum response factor) [NCBI Gene 6722] {aka MCM1}, SLITRK3 (SLIT and NTRK like family member 3) [NCBI Gene 22865], DES (desmin) [NCBI Gene 1674] {aka CDCD3, CSM1, CSM2, LGMD1D, LGMD1E, LGMD2R}, P2RX1 (purinergic receptor P2X 1) [NCBI Gene 5023] {aka P2X1}, HINT3 (histidine triad nucleotide binding protein 3) [NCBI Gene 135114] {aka HINT4}, KIF25 (kinesin family member 25) [NCBI Gene 3834] {aka KNSL3}, MLLT10 (MLLT10 histone lysine methyltransferase DOT1L cofactor) [NCBI Gene 8028] {aka AF10}, DEAF1 (DEAF1 transcription factor) [NCBI Gene 10522] {aka MRD24, NEDHELS, NUDR, SPN, VSVS, ZMYND5}, FOS (Fos proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 2353] {aka AP-1, C-FOS, p55}, KIF22 (kinesin family member 22) [NCBI Gene 3835] {aka A-328A3.2, KID, KNSL4, OBP, OBP-1, OBP-2}, SRP14 (signal recognition particle 14) [NCBI Gene 6727] {aka ALURBP}, GAS2L2 (growth arrest specific 2 like 2) [NCBI Gene 246176] {aka CILD41, GAR17}, NGF (nerve growth factor) [NCBI Gene 4803] {aka Beta-NGF, HSAN5, NGFB}, SIRT1 (sirtuin 1) [NCBI Gene 23411] {aka SIR2, SIR2L1, SIR2alpha}, TEAD3 (TEA domain transcription factor 3) [NCBI Gene 7005] {aka DTEF-1, ETFR-1, TEAD-3, TEAD5, TEF-5, TEF5}, BMF (Bcl2 modifying factor) [NCBI Gene 90427], BSN (bassoon presynaptic cytomatrix protein) [NCBI Gene 8927] {aka ZNF231}, SBDS (SBDS ribosome maturation factor) [NCBI Gene 51119] {aka CGI-97, SDO1, SDS, SWDS}
- **Diseases:** cancer (MESH:D009369), anxiety (MESH:D001007), ovarian endometrioma (MESH:D010049), peritoneal lesions (MESH:D010532), Disease (MESH:D004194), major depression (MESH:D003865), mental disorders (MESH:D001523), Endometriosis (MESH:D004715), depression (MESH:D003866), pain (MESH:D010146)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

49 references — full list in the complete paper: https://tomesphere.com/paper/PMC12785795/full.md

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Source: https://tomesphere.com/paper/PMC12785795