# Nodal Marginal Zone Lymphoma with Prominent Expansion of PD-1+ T-Follicular Helper Cells: A Persistent Diagnostic Challenge with a Heterogeneous Mutational Architecture

**Authors:** Stefania Crisci, Annarosaria De Chiara, Maria Oro, Maria Rivieccio, Annalisa Altobelli, Sara Mele, Letizia Sirica, Daniela Donnarumma, Matteo Bonanni, Annarosa Cuccaro, Alberto Fresa, Rosaria De Filippi, Antonio Pinto

PMC · DOI: 10.3390/ijms27010051 · International Journal of Molecular Sciences · 2025-12-20

## TL;DR

This paper describes a rare case of nodal marginal zone lymphoma with a high number of PD-1+ T-cells, highlighting diagnostic challenges and unique genetic mutations.

## Contribution

The study presents a novel case of NMZL with prominent PD-1+ T-cells and identifies tissue-specific mutational patterns using next-generation sequencing.

## Key findings

- NMZL can present with PD-1+ T-cells mimicking T-cell lymphoma, complicating diagnosis.
- NGS revealed NMZL-associated mutations with distinct distributions in lymph node and bone marrow.
- Tissue-specific mutations like NOTCH2, TNFRSF14, KMT2D, and TP53 were identified.

## Abstract

Nodal marginal zone lymphoma (NMZL) is an indolent B-cell lymphoma that may pose diagnostic challenges due to the absence of distinct markers. In rare atypical cases, an overabundance of PD1+ T follicular helper (TFH) cells in tumor tissue may mimic peripheral T-cell lymphoma (PTCL) of TFH origin, further complicating the diagnosis. A 72-year-old woman with progressive lymphadenopathy had a cervical lymph node biopsy showing a disrupted architecture with monomorphic nodules of CD20+/MNDA+ B-cells and a prominent central population of proliferating CD4+/PD1+ T-cells, initially suggestive of a PTCL-TFH. The bone marrow contained aggregates of CD20+ B-cells intermixed with CD3+/CD4+/PD1+ T-cells. Next-generation sequencing (NGS) revealed clonal immunoglobulin heavy-chain rearrangements in the lymph node and bone marrow, with T-cell receptor genes displaying a polyclonal pattern. Targeted NGS showed no PTCL-related alterations but identified NMZL-associated mutations with different distributions across lymph node and bone marrow compartments. NOTCH2 mutations (c.6418C>T; p.Gln2140*) were found in both tissues, while the (c.69+2T>A; p.?) TNFRSF14 gene mutation was only detected in the lymph node. The KMT2D gene displayed a frameshift variant in the lymph node (c.4801_4802delinsT; p.Arg1601Leufs*3) and an in-frame deletion (c.11756_11758del; p.Gln3919del) in the bone marrow. Notably, NGS and digital droplet PCR confirmed a TP53 frameshift mutation (c.902del; p.Pro301Glnfs*44) with a fractional abundance of 0.31% in the lymph node and a (c.742C>T; p.Arg248Trp) mutation (0.309%) in the bone marrow. Results underscore the importance of NGS-based clonality to diagnose NMZL with prominent PD1+ T-cell hyperplasia, and prompt further investigation into tissue-specific mutational signatures in these unusual cases.

## Linked entities

- **Genes:** NOTCH2 (notch receptor 2) [NCBI Gene 4853], TNFRSF14 (TNF receptor superfamily member 14) [NCBI Gene 8764], KMT2D (lysine methyltransferase 2D) [NCBI Gene 8085], TP53 (tumor protein p53) [NCBI Gene 7157]
- **Proteins:** MS4A1 (membrane spanning 4-domains A1), MNDA (myeloid cell nuclear differentiation antigen), CD4 (CD4 molecule), PDCD1 (programmed cell death 1), cd.3 (Cd.3 conserved hypothetical protein)
- **Diseases:** nodal marginal zone lymphoma (MONDO:0019465), peripheral T-cell lymphoma (MONDO:0000430)

## Full-text entities

- **Genes:** TNFRSF14 (TNF receptor superfamily member 14) [NCBI Gene 8764] {aka ATAR, CD270, HVEA, HVEM, LIGHTR, TR2}, KMT2D (lysine methyltransferase 2D) [NCBI Gene 8085] {aka AAD10, ALR, BCAHH, CAGL114, KABUK1, KMS}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, KRT20 (keratin 20) [NCBI Gene 54474] {aka CD20, CK-20, CK20, K20, KRT21}, MNDA (myeloid cell nuclear differentiation antigen) [NCBI Gene 4332] {aka PYHIN3}, NOTCH2 (notch receptor 2) [NCBI Gene 4853] {aka AGS2, HJCYS, hN2}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}
- **Diseases:** T-cell hyperplasia (MESH:D006965), lymphadenopathy (MESH:D008206), B-cell lymphoma (MESH:D016393), PTCL (MESH:D016411), NMZL (MESH:D018442), tumor (MESH:D009369)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12785623/full.md

## References

55 references — full list in the complete paper: https://tomesphere.com/paper/PMC12785623/full.md

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Source: https://tomesphere.com/paper/PMC12785623