# CLC3 regulates V-ATPase to enhance lysosomal degradation and cisplatin resistance in cervical cancer cells

**Authors:** Chuyun Chen, Fubin Zhang, Jiayi Shen, Qi Zheng, Zhiyun Zhang, Shun Lu, Lixiao Liu, Tianhong Zhu, Yongming Du, Yutao Guan

PMC · DOI: 10.1038/s41420-025-02876-0 · Cell Death Discovery · 2025-12-03

## TL;DR

This study shows that CLC3 enhances lysosomal function and cisplatin resistance in cervical cancer cells by regulating V-ATPase.

## Contribution

The novel finding is that CLC3 modulates V-ATPase activity to promote chemoresistance and tumor progression in cervical cancer.

## Key findings

- CLC3 upregulation reduces chemosensitivity and enhances lysosomal acidification in cervical cancer cells.
- CLC3 promotes tumor stemness and proliferation via ATP6V1A subunit of V-ATPase.
- CLC3 knockdown combined with V-ATPase inhibition increases cisplatin sensitivity and reduces tumor growth in mice.

## Abstract

Chemoresistance remains a major challenge in cervical cancer (CVC) treatment. Lysosomal function, mediated by V-ATPase, is critical in cancer progression and drug resistance. CLC3, a chloride channel that regulates lysosomal acidification, may contribute to chemoresistance by modulating V-ATPase activity. This study aims to investigate the role of CLC3 in modulating lysosomal function, chemoresistance, and tumorigenesis in CVC. CLC3 expression in CVC cell lines was assessed, and chemoresistance was evaluated using IC50 calculations for cisplatin, paclitaxel, and 5-FU. Effects of CLC3 downregulation or overexpression on lysosomal pH, autophagy, apoptosis, cell proliferation, cell cycle progression, and tumor stemness were analyzed. A general V-ATPase inhibitor was used to assess changes in lysosomal pH and protein degradation, while a2v-mAb was applied to investigate the interaction between CLC3 and specific V-ATPase subunits. In vivo, a mouse xenograft model was used to assess the effects of CLC3 modulation on tumor growth and response to chemoresistance. CLC3 was upregulated in CVC cells, reducing chemosensitivity. Overexpression of CLC3 enhanced cytosolic alkalinization, lysosomal acidification, and protein degradation while inhibiting autophagy and apoptosis independently. CLC3 promoted cell proliferation and tumor stemness via V-ATPase activity, particularly ATP6V1A. CLC3 knockdown combined with V-ATPase inhibition decreased proliferation and increased cisplatin sensitivity. In vivo, CLC3 knockdown with cisplatin reduced tumor volume and increased apoptosis, whereas overexpression promoted cisplatin resistance. CLC3 plays a pivotal role in chemoresistance and tumor progression in CVC by regulating lysosomal function via V-ATPase. Targeting CLC3 and its downstream pathways may provide novel therapeutic strategies to overcome chemoresistance.

## Linked entities

- **Genes:** CLCN3 (Cl-/H+ antiporter 3) [NCBI Gene 1182], ATP6V1A (ATPase H+ transporting V1 subunit A) [NCBI Gene 523]
- **Proteins:** VhaSFD (Vacuolar H[+]-ATPase SFD subunit)
- **Chemicals:** cisplatin (PubChem CID 5460033), paclitaxel (PubChem CID 36314), 5-FU (PubChem CID 3385)
- **Diseases:** cervical cancer (MONDO:0002974)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Clcn3 (chloride channel, voltage-sensitive 3) [NCBI Gene 12725] {aka Clc3}, Atp6v1a (ATPase, H+ transporting, lysosomal V1 subunit A) [NCBI Gene 11964] {aka Atp6a1, Atp6a2, Atp6v1a1, VA68, VPP2}, Atp6v0d2 (ATPase, H+ transporting, lysosomal V0 subunit D2) [NCBI Gene 242341] {aka 1620401A02Rik, V-ATPase}
- **Diseases:** cancer (MESH:D009369), tumorigenesis (MESH:D063646), CVC (MESH:D002583)
- **Chemicals:** 5-FU (MESH:D005472), cisplatin (MESH:D002945), paclitaxel (MESH:D017239)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12783824/full.md

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Source: https://tomesphere.com/paper/PMC12783824