# Pp6-Pfkfb1 axis modulates intracellular bacterial proliferation by orchestrating host-pathogen metabolic crosstalk

**Authors:** Li Fan, Yang Sun, Fangzhou Lou, Zilong Fang, Wenxiang Ding, Xiangxiao Li, Yan Li, Qingqing Shen, Siyu Deng, Jihuan Liang, Fengjiao Zhang, Sibei Tang, Zhikai Wang, Xiaojie Cai, Jiajia Tong, Zhenyao Xu, Jing Zou, Qing Yang, Honglin Wang

PMC · DOI: 10.1371/journal.ppat.1013304 · PLOS Pathogens · 2025-12-31

## TL;DR

The study reveals how intracellular bacteria manipulate host metabolism through the Pp6-Pfkfb1 pathway to enhance their survival.

## Contribution

The discovery of the Pp6-Pfkfb1 axis as a key regulator of host-pathogen metabolic interactions during intracellular bacterial infection.

## Key findings

- Pp6 deficiency increases bacterial growth in macrophages by altering metabolic pathways.
- Pfkfb1 promotes bacterial proliferation by modulating nitric oxide and arginine metabolism.
- miR-31 deletion enhances bacterial clearance by upregulating Pp6.

## Abstract

Intracellular bacterial pathogens exhibit heterogeneous replication rates within host macrophages, but the mechanisms by which they manipulate host factors for survival remain incompletely understood. Using a fluorescence-dilution reporter system in Salmonella Typhimurium (Salmonella)-infected macrophages, we found that Protein Phosphatase 6 (Pp6) was downregulated in macrophages harboring growing bacteria. Conditional knockout of Pp6 elevated host susceptibility to Salmonella-mediated lethality due to compromised antimicrobial defenses. MicroRNA-31 (miR-31) was identified as a negative regulator of Pp6, and its conditional ablation enhanced bacterial clearance. Yeast two-hybrid screening identified 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 (Pfkfb1), a metabolic regulator, as a substrate of Pp6. Pp6 deficiency resulted in significantly elevated expression of Pfkfb1, which was highly expressed in macrophages containing replicating Salmonella. Pfkfb1 deletion restricted bacterial proliferation by promoting nitric oxide (NO) production while concurrently suppressing arginase-1 (Arg-1) expression and impairing arginine metabolism in macrophages. Collectively, these results establish the Pp6-Pfkfb1 axis as a key regulator of host metabolic adaptation and intracellular bacterial survival, offering potential therapeutic targets against multidrug-resistant pathogens.

Intracellular pathogens secrete effector proteins that intercept and modify host cells to usurp host defenses and establish habitable intracellular niches, yet the host factors that are critical for intracellular bacterial survival are not fully understood. Using a fluorescence-dilution reporter system in Salmonella Typhimurium (Salmonella)-infected macrophages, we found Protein Phosphatase 6 (Pp6) was decreased in macrophages harboring replicating Salmonella and Pp6 deficiency increased bacterial growth in macrophages. On the other hand, the deletion of microRNA-31 (miR-31), a negative regulator of Pp6, enhanced Salmonella clearance. Furthermore, through yeast two-hybrid screening, we identified 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 (Pfkfb1) is a substrate of Pp6. And we demonstrated that Pfkfb1, abundantly expressed in macrophages containing growing bacteria, is crucial for Salmonella proliferation by regulating nitric oxide (NO) levels, arginase-1 (Arg-1) expression and arginine metabolism. Overall, the molecular changes in Pp6-Pfkfb1 axis drive host metabolic adaptations that enable intracellular bacterial survival.

## Linked entities

- **Genes:** PPP6C (protein phosphatase 6 catalytic subunit) [NCBI Gene 5537], PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1) [NCBI Gene 5207], MIR31 (microRNA 31) [NCBI Gene 407035], ARG1 (arginase 1) [NCBI Gene 383]
- **Proteins:** Arg1 (arginase 1)
- **Chemicals:** nitric oxide (PubChem CID 145068)

## Full-text entities

- **Chemicals:** NO (MESH:D009569)
- **Species:** Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Salmonella enterica subsp. enterica serovar Typhimurium (no rank) [taxon 90371]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12782431/full.md

## References

36 references — full list in the complete paper: https://tomesphere.com/paper/PMC12782431/full.md

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Source: https://tomesphere.com/paper/PMC12782431