# A pipeline for comparing and combining TSPO‐PET tracers in Alzheimer's disease

**Authors:** Harry Crook, Nicolai Franzmeier, Nesrine Rahmouni, Johannes Gnörich, Alexandra Strauss, Sebastian Roemer‐Cassiano, Carla Palleis, P Simon Jones, Tim D Fryer, Young T Hong, Franklin I Aigbirhio, Johannes Levin, Günter U Höglinger, James B Rowe, John T O'Brien, Pedro Rosa‐Neto, Matthias Brendel, Maura Malpetti

PMC · DOI: 10.1002/alz70856_104920 · 2026-01-07

## TL;DR

This paper introduces a pipeline to compare and standardize TSPO-PET tracers for measuring neuroinflammation in Alzheimer's disease across multiple centers.

## Contribution

The study presents a novel method for harmonizing different TSPO-PET tracers in multi-center Alzheimer's research.

## Key findings

- The pipeline effectively standardizes regional quantification of microglial activation across tracers.
- Small tracer-specific effects were identified in some brain regions.
- Moderate correlations between tracers were observed in patient and control groups.

## Abstract

Neuroinflammation is a key pathological driver of neurodegenerative diseases, including Alzheimer's disease (AD). Positron emission tomography (PET) with tracers targeting the translocator protein (TSPO) enables the in vivo quantification of microglial activation. Currently, direct comparison between TSPO‐PET tracers in AD have not been performed. Here, we tested a pipeline to quantitatively compare different TSPO‐PET tracers in clinically‐matched cohorts of patients with AD across multi‐centre data.

32 people with AD and 15 controls underwent [11C]PK11195‐PET at the University of Cambridge, 45 people with AD and 19 controls underwent [18F]GE180‐PET at Ludwig‐Maximilians‐University of Munich, and 25 people with AD and 25 controls underwent [11C]PBR28‐PET at McGill University. Participants across the centres were matched for age, sex, and clinical severity. Pre‐processing of scans was harmonised across centres, and regional SUVr of tracers were obtained using a shared reference region and atlas. Z‐scores of regional SUVr values for each participant were calculated based on centre‐specific controls. Dissimilarity and clustering analyses were performed to assess the effectiveness of the standardisation pipeline. Figure 1 outlines the methodology.

Clustering analyses identified no tracer‐specific patterns in the distribution of z‐scores following standardisation. Across all tracers, regional z‐scores of the AD groups were significantly different between tracers in 7 of 41 brain regions, while no differences were found for controls (Figure 2). Full factorial analysis found a main effect of tracer; however, these were due to interaction effects with disease group, sex, age, and brain region and explained very little of the variance. Pattern similarity between representational similarity matrices found moderate correlations between the three tracers in patient and control groups.

These results suggest that our pipeline is effective at harmonising TSPO‐PET tracers and standardising the regional quantification of microglial activation in the context of different AD cohorts. Dissimilarity analyses identified small tracer‐specific effects, however. Ongoing work aims to optimize this pipeline in order to compare and combine TSPO‐PET tracers in other tauopathies (ie PSP) and to identify thresholds of “inflammation severity” related to clinical outcomes.

## Linked entities

- **Proteins:** TSPO (translocator protein)
- **Chemicals:** [11C]PK11195 (PubChem CID 450825), [18F]GE180 (PubChem CID 51040949), [11C]PBR28 (PubChem CID 11653141)
- **Diseases:** Alzheimer's disease (MONDO:0004975), PSP (MONDO:0010997)

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12779602/full.md

---
Source: https://tomesphere.com/paper/PMC12779602