# The complete chloroplast genome and phylogenetic analysis of Fraxinus paxiana Lingelsh. 1907 (Oleaceae)

**Authors:** Hong Feng, Wei Sun, Xiangxiao Meng, Shilin Chen

PMC · DOI: 10.1080/23802359.2025.2573760 · 2026-01-05

## TL;DR

This paper presents the complete chloroplast genome of Fraxinus paxiana and its phylogenetic relationships with other Fraxinus species.

## Contribution

The study provides a new chloroplast genome sequence and phylogenetic insights for Fraxinus paxiana.

## Key findings

- The chloroplast genome of Fraxinus paxiana is 155,692 bp with a GC content of 37.87%.
- Phylogenetic analysis reveals two branches in the genus Fraxinus, with F. paxiana and F. insularis being most closely related.

## Abstract

Fraxinus paxiana distributed in Shaanxi, Gansu, Hubei, Hunan, and Sichuan provinces, is used as a local medicine in Shaanxi and also serves as an adulterant of traditional Chinese medicine Qinpi. Here, we assembled its 155,692 bp chloroplast genome (GC content 37.87%) with a typical quadripartite structure. A total of 133 genes were annotated, including 88 protein-coding genes, 37 tRNA genes, and eight rRNA genes. We identified 43 SSRs, predominantly composed of mononucleotide repeats. Phylogenetic analysis showed that the genus Fraxinus is divided into two branches, with F. paxiana and F. insularis having the closest phylogenetic relationship.

## Linked entities

- **Species:** Fraxinus paxiana (taxon 490846), Fraxinus insularis (taxon 757445)

## Full-text entities

- **Species:** Fraxinus (ash trees, genus) [taxon 38871], Fraxinus paxiana (qin ling qin, species) [taxon 490846]

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12777748/full.md

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Source: https://tomesphere.com/paper/PMC12777748