# Drug susceptibility of a clinical isolate of Balamuthia mandrillaris, a pathogenic free-living amoeba

**Authors:** Pratima Dubey, Porntida Kobpornchai, Nongnat Tongkrajang, Suwipa Chaiyaloom, Chenyang Lu, Christopher A. Rice, Kasem Kulkeaw

PMC · DOI: 10.1128/aac.01482-25 · 2025-12-10

## TL;DR

This study tests how well various drugs kill a new strain of Balamuthia mandrillaris, a deadly amoeba, to help improve treatments for BAE.

## Contribution

The study evaluates drug susceptibility of a new clinical isolate of B. mandrillaris and identifies nitroxoline as the most effective amoebicidal drug.

## Key findings

- Nitroxoline showed the highest amoebicidal activity without recrudescence.
- Topical antiseptics caused amoeba lysis at all tested doses.
- The KM-20 isolate had reduced drug susceptibility compared to other strains.

## Abstract

Balamuthia amoebic encephalitis (BAE) is a highly fatal infection caused by Balamuthia mandrillaris, an amoeba that lives in soil and water. In Thailand, three fatal cases of BAE have been documented, but no survivors have been reported, raising questions about current treatment regimens. Previous drug repurposing studies reveal some potent pharmacological compounds, but the drug susceptibility of the clinical isolate of pathogenic amoeba remains variable. Given the success in isolating B. mandrillaris from the human biopsied brain, this study aims to assess the amoebicidal effect of several previously repurposed drugs and suggested therapies for BAE. The trophozoites of a new clinical isolate, the KM-20 strain, were exposed to 12 compounds, including pentamidine, the most widely used antiprotozoal drug, and nitroxoline, the recent radical cure for BAE. The amoebicidal effect was assessed using the ATP level as a cell survival biomarker. The circularity and surface area of the cells were used as recrudescence indicators. Among all drugs tested, nitroxoline is the most potent amoebicidal drug without recrudescence. Topical antiseptic agents caused amoeba lysis at all doses tested, suggesting potential use for cutaneous balamuthiasis. Compared with two laboratory-adapted V039 and PRA-291 strains, the KM-20 isolate had reduced drug susceptibility to all of the tested compounds, suggesting strain dependency of amoebicidal activity. This study provides drug susceptibility data against a novel and geographically diverse clinical isolate of B. mandrillaris to assist in prioritizing anti-Balamuthia agents for further drug development testing, followed by in vivo efficacy testing animal models before clinical trials and drug repurposing.

## Linked entities

- **Chemicals:** pentamidine (PubChem CID 4735), nitroxoline (PubChem CID 19910)
- **Species:** Balamuthia mandrillaris (taxon 66527)

## Full-text entities

- **Diseases:** BAE (MESH:D004660), infection (MESH:D007239)
- **Chemicals:** nitroxoline (MESH:C005308), ATP (MESH:D000255), pentamidine (MESH:D010419)
- **Species:** Homo sapiens (human, species) [taxon 9606], Balamuthia mandrillaris (species) [taxon 66527], Balamuthia (genus) [taxon 66526]
- **Cell lines:** KM-20 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_L095)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12777557/full.md

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Source: https://tomesphere.com/paper/PMC12777557