# Mechanisms of resistance to trastuzumab deruxtecan in breast cancer elucidated by multi-omic molecular profiling

**Authors:** George W. Sledge, Joanne Xiu, Reshma L. Mahtani, Ana C. Sandoval Leon, Funda Meric-Bernstam, Jennifer R. Ribeiro, Ninad N. Kulkarni, Dileep R. Rampa, Jangsoon Lee, Naoto T. Ueno, Matthew J. Oberley, Milan Radovich, David B. Spetzler

PMC · DOI: 10.1038/s41523-025-00868-y · NPJ Breast Cancer · 2025-12-20

## TL;DR

This study identifies molecular factors linked to resistance to a breast cancer drug, offering insights for better treatment strategies.

## Contribution

The study reveals new resistance mechanisms involving HER2 and ABCC1 in trastuzumab deruxtecan treatment.

## Key findings

- Higher HER2 and lower ABCC1 expression correlate with better survival in T-DXd-treated patients.
- Mutations in ERBB2, NFE2L2, and KEAP1 are enriched in post-T-DXd samples, suggesting resistance pathways.
- ABCC1 predicts survival independently of HER2, highlighting its role in drug resistance.

## Abstract

Trastuzumab deruxtecan (T-DXd) is an antibody-drug conjugate successfully used to treat HER2-low and HER2-positive metastatic breast cancer, but resistance consistently develops. Using multivariate Cox proportional hazards in a real-world cohort of 2,799 patients with breast cancer, we aimed to identify clinically relevant T-DXd resistance mechanisms. In patients with samples collected prior to T-DXd treatment, higher expression of ERBB2 (HER2) and lower expression of ABCC1 (an ATP-binding cassette transporter involved in drug efflux) were significantly associated with longer T-DXd-related overall survival (OS); ABCC1 predicted OS independently of HER2. Furthermore, mutations in several genes were enriched in post-T-DXd samples compared to unmatched T-DXd-naïve samples, including ERBB2, NFE2L2 (a transcriptional activator of ABCC1), and KEAP1 (a negative regulator of NFE2L2), indicating plausible resistance mechanisms related to HER2 target levels and ABCC1-mediated drug efflux. Identifying such resistance mechanisms might lead to improved methods of precision oncology and novel therapeutic approaches to overcome resistance.

## Linked entities

- **Genes:** ERBB2 (erb-b2 receptor tyrosine kinase 2) [NCBI Gene 2064], ABCC1 (ATP binding cassette subfamily C member 1 (ABCC1 blood group)) [NCBI Gene 4363], NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780], KEAP1 (kelch like ECH associated protein 1) [NCBI Gene 9817]
- **Diseases:** breast cancer (MONDO:0004989)

## Full-text entities

- **Genes:** NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, KEAP1 (kelch like ECH associated protein 1) [NCBI Gene 9817] {aka INrf2, KLHL19}, ERBB2 (erb-b2 receptor tyrosine kinase 2) [NCBI Gene 2064] {aka CD340, HER-2, HER-2/neu, HER2, MLN 19, MLN-19}, ABCC1 (ATP binding cassette subfamily C member 1 (ABCC1 blood group)) [NCBI Gene 4363] {aka ABC29, ABCC, DFNA77, GS-X, MRP, MRP1}
- **Diseases:** breast cancer (MESH:D001943)
- **Chemicals:** Trastuzumab deruxtecan (MESH:C000614160), T-DXd (-)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12774910/full.md

## References

7 references — full list in the complete paper: https://tomesphere.com/paper/PMC12774910/full.md

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Source: https://tomesphere.com/paper/PMC12774910