# Targeted RNAi screen reveals novel regulators of RNA-binding protein phase transitions in Caenorhabditis elegans oocytes

**Authors:** Mohamed T Elaswad, Grace M Thomas, Corrin Hays, Nicholas J Trombley, Jennifer A Schisa

PMC · DOI: 10.1093/g3journal/jkaf266 · G3: Genes | Genomes | Genetics · 2025-11-10

## TL;DR

This study identifies new genes that regulate phase transitions of an RNA-binding protein in C. elegans oocytes, revealing a distinct but related process to protein aggregate clearance.

## Contribution

The paper discovers 6 novel regulators of RNA-binding protein phase transitions in C. elegans oocytes.

## Key findings

- Six new genes regulate phase transitions of the KH-domain protein MEX-3 in oocytes.
- Regulation of MEX-3 phase transitions overlaps but is distinct from protein aggregate clearance.
- The study provides insight into oocyte quality control mechanisms in C. elegans.

## Abstract

The ability of oocytes to maintain their quality is essential for successful reproduction. One critical aspect of oocyte quality and successful embryogenesis after fertilization is the proper regulation of the stores of maternal mRNA by RNA-binding proteins. Many RNA-binding proteins undergo regulated phase transitions during oogenesis, and alterations of the protein phase can disrupt its ability to regulate mRNA stability and translation. In Caenorhabditis elegans, regulators of RNA-binding protein phase transitions in maturing oocytes of young adult hermaphrodites remain poorly characterized. However, a few recently identified genes are also required for the clearance of damaged proteins during maturation, suggesting coordination between these processes. To explore this relationship and gain insight into the regulation of phase transitions, we conducted a targeted RNAi screen of genes required for removal of protein aggregates in maturing oocytes. Here, we identify 6 novel regulators of phase transitions of the KH-domain protein MEX-3. We present strong evidence that the regulation of MEX-3 phase transitions in the oocyte overlaps with, but is distinct from, the regulatory network of protein aggregate clearance.

## Linked entities

- **Genes:** MEX3D (mex-3 RNA binding family member D) [NCBI Gene 399664]
- **Proteins:** MEX3D (mex-3 RNA binding family member D)
- **Species:** Caenorhabditis elegans (taxon 6239)

## Full-text entities

- **Genes:** mex-3 (Growth-regulating factor;K Homology domain-containing protein) [NCBI Gene 171607]
- **Species:** Caenorhabditis elegans (species) [taxon 6239], C. elegans [taxon 328850]

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12774588/full.md

## References

55 references — full list in the complete paper: https://tomesphere.com/paper/PMC12774588/full.md

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Source: https://tomesphere.com/paper/PMC12774588