# Design of solubly expressed miniaturized SMART MHCs

**Authors:** William L. White, Hua Bai, Chan Jhong Kim, Kevin M. Jude, Renhua Sun, Laura Guerrero, Xiao Han, Xiaojing Tina Chen, Apala Chaudhuri, Julia E. Bonzanini, Yi Sun, Amarachi E. Onwuka, Nan Wang, Chunyu Wang, Per-Åke Nygren, Xinting Li, Inna Goreshnik, Aza Allen, Paul M. Levine, Hao Yuan Kueh, Michael C. Jewett, Nikolaos G. Sgourakis, Adnane Achour, K. Christopher Garcia, David Baker

PMC · DOI: 10.1073/pnas.2505932123 · Proceedings of the National Academy of Sciences of the United States of America · 2026-03-21

## TL;DR

Scientists designed a new type of MHC protein that can be produced in bacteria and retains the ability to bind T-cells and peptides, helping study immune responses.

## Contribution

The novel SMART MHCs replace β2m and α3 domain, enabling soluble expression and maintaining functional binding properties.

## Key findings

- SMART MHCs retain peptide- and TCR-binding specificity.
- Peptide-bound SMART MHC structures resemble native MHCs.
- SMART MHCs can be produced in E. coli in soluble form.

## Abstract

The precise recognition of specific peptide-MHC (pMHC) complexes by T-cell receptors (TCRs) plays a key role in infectious disease, cancer and autoimmunity. A critical step in many immunobiological studies is the identification of T-cells expressing TCRs specific to a given pMHC antigen. However, the intrinsic instability of empty class-I MHCs limits their soluble expression in Escherichia coli and makes it very difficult to characterize even a small fraction of possible pMHC/TCR interactions. To overcome this limitation, we designed small proteins which buttress the peptide binding groove of class I MHCs, replacing β2-microglobulin (β2m) and the heavy chain α3 domain, and enable soluble and partially soluble expression in E. coli of H-2Db and A*02:01, respectively. We demonstrate that these soluble, monomeric, antigen-receptive, truncated (SMART) MHCs retain both peptide- and TCR-binding specificity, and that peptide-bound structures of both allomorphs are similar to their full-length, native counterparts. With extension to the majority of HLA alleles, SMART MHCs should be broadly useful for probing the T-cell repertoire in approaches ranging from yeast display to T-cell staining.

## Linked entities

- **Proteins:** Tcr (Third chromosome alpha methyl dopa-resistant), HLA-C (major histocompatibility complex, class I, C)
- **Diseases:** infectious disease (MONDO:0005550), cancer (MONDO:0004992)
- **Species:** Escherichia coli (taxon 562)

## Full-text entities

- **Diseases:** cancer (MESH:D009369), infectious disease (MESH:D003141)
- **Species:** Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12773744/full.md

## References

73 references — full list in the complete paper: https://tomesphere.com/paper/PMC12773744/full.md

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Source: https://tomesphere.com/paper/PMC12773744