# The secretome of the environmental bacterium Pseudomonas protegens PBL3 has broad-spectrum antimicrobial activity against plant and human pathogenic bacteria

**Authors:** Biwesh Ojha, Kiyara Grosz, Clemencia M. Rojas

PMC · DOI: 10.1128/spectrum.02669-25 · Microbiology Spectrum · 2025-11-26

## TL;DR

A soil bacterium called Pseudomonas protegens PBL3 produces a mix of antimicrobial molecules that can fight both plant and human pathogens, offering a new approach to combat antibiotic resistance.

## Contribution

The study identifies the secretome of Pseudomonas protegens PBL3 as a novel, broad-spectrum antimicrobial source effective against multiple plant and human pathogens.

## Key findings

- The secretome of Pseudomonas protegens PBL3 inhibits the growth of plant pathogen Burkholderia sp. and human pathogens like Acinetobacter baumannii and Staphylococcus aureus.
- Growth inhibition levels ranged from 25% to 95% across tested pathogens.
- The secretome's diverse chemical composition may reduce resistance development in bacteria.

## Abstract

Antimicrobials are widely used to manage bacterial diseases in humans, pets, and livestock. Unfortunately, their extensive use has contributed to the emergence of antimicrobial resistance (AMR), a threat to global health. In contrast to the widespread antimicrobial use in medicine and veterinary, the use of antimicrobials to control bacterial diseases in plants is limited, posing a threat to global food security. These two threats highlight the urgent need to discover novel antimicrobial compounds with new modes of action. Previously, we demonstrated that the environmental bacterium Pseudomonas protegens PBL3 inhibits the growth of the plant pathogenic bacterium Burkholderia glumae, indicating that this strain produces and secretes potent antimicrobial compounds. In this study, we showed that the P. protegens PBL3 secretome also shows a broad spectrum of activity against plant pathogenic Burkholderia sp., as well as the human pathogens Acinetobacter baumannii, Escherichia coli O157:H7, Listeria innocua, Enterococcus faecium, and Staphylococcus aureus, with levels of growth inhibition ranging from 25% to 95% depending on the specific pathogen. These results highlight the P. protegens PBL3 secretome as a promising source of natural antimicrobial compounds with potential applications in both agriculture and clinical settings.

This work shows that the environmental bacterium called Pseudomonas protegens PBL3 produces and secretes molecules that have a broad spectrum of activity against pathogenic bacteria causing important diseases in plants and humans. The use of the collection of molecules that P. protegens PBL3 produces and secretes (secretome) instead of single molecules is likely to be more effective, as this collection of molecules is expected to be of diverse chemical structure and mode of action, which makes it less likely that pathogenic bacteria develop resistance to them. These findings highlight the potential of beneficial microbes as a sustainable source of broad and effective antimicrobials for both agriculture and medicine.

## Linked entities

- **Species:** Burkholderia glumae (taxon 337), Burkholderia sp. (taxon 36773), Acinetobacter baumannii (taxon 470), Escherichia coli O157:H7 (taxon 83334), Listeria innocua (taxon 1642), Enterococcus faecium (taxon 1352), Staphylococcus aureus (taxon 1280)

## Full-text entities

- **Diseases:** bacterial diseases (MESH:D001424)
- **Species:** Enterococcus faecium (species) [taxon 1352], Homo sapiens (human, species) [taxon 9606], Acinetobacter baumannii (species) [taxon 470], Pseudomonas protegens (species) [taxon 380021], Burkholderia sp. (species) [taxon 36773], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Staphylococcus aureus (species) [taxon 1280], Listeria innocua (species) [taxon 1642], Escherichia coli O157:H7 (no rank) [taxon 83334], Burkholderia glumae (species) [taxon 337]

## Full text

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## Figures

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## References

41 references — full list in the complete paper: https://tomesphere.com/paper/PMC12772282/full.md

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Source: https://tomesphere.com/paper/PMC12772282