# IPTG- and estradiol-inducible gene expression systems in the unicellular red alga Cyanidioschyzon merolae

**Authors:** Takayuki Fujiwara, Shunsuke Hirooka, Shota Yamashita, Shin-ya Miyagishima

PMC · DOI: 10.1093/plphys/kiaf575 · Plant Physiology · 2025-11-10

## TL;DR

Researchers developed new gene expression systems in a simple red alga to study photosynthetic eukaryotes without disrupting cell function.

## Contribution

New IPTG- and estradiol-based inducible systems that avoid physiological disruption in Cyanidioschyzon merolae.

## Key findings

- IPTG and estradiol inducible systems were developed without affecting cellular growth or transcriptome.
- Estradiol system successfully knocked down the DRP5B protein in chloroplast division.
- These systems enable functional genomic studies in photosynthetic eukaryotes.

## Abstract

The genetically tractable unicellular red alga Cyanidioschyzon merolae has a remarkably simple genome (4,775 nucleus-encoded proteins) and cellular architecture. It contains only a single set of most membranous organelles, making it a valuable tool for elucidating the fundamental mechanisms of photosynthetic eukaryotes. However, as in other genetically tractable eukaryotic algae, previously developed systems for inducible gene expression rely on environmental stimuli such as heat shock or ammonium depletion, which impact cellular physiology and thus limit their usage. To overcome this issue, we developed IPTG- and estradiol-inducible gene expression systems in C. merolae in which the addition of these chemicals itself has no impact on cellular growth or the transcriptome. Additionally, we established IPTG- and estradiol-inducible protein knockdown systems and successfully degraded the endogenous chloroplast division protein DRP5B using the estradiol-inducible system. These systems facilitate functional genomic analyses in C. merolae, especially for understanding physiological mechanisms and their interactions in photosynthetic eukaryotes.

Controllable gene expression and protein levels in a red alga provide powerful tools for studying photosynthetic eukaryotes.

## Linked entities

- **Proteins:** drp5B (dynamin-related GTPase)
- **Chemicals:** IPTG (PubChem CID 656894), estradiol (PubChem CID 450)
- **Species:** Cyanidioschyzon merolae (taxon 45157)

## Full-text entities

- **Chemicals:** IPTG (MESH:D007544), estradiol (MESH:D004958), ammonium (MESH:D064751)
- **Species:** PX clade (clade) [taxon 569578], Cyanidioschyzon merolae (species) [taxon 45157]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12770821/full.md

## References

116 references — full list in the complete paper: https://tomesphere.com/paper/PMC12770821/full.md

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Source: https://tomesphere.com/paper/PMC12770821