# Transcriptional rewiring in cancer driven by POLR2A/RPB1: mechanistic insights, non-coding RNA crosstalk, and therapeutic opportunities

**Authors:** Adrian Szczepaniak, Kinga Jaskuła, Marta Zielińska, Jakub Godlewski

PMC · DOI: 10.3389/fphar.2025.1745087 · Frontiers in Pharmacology · 2025-12-19

## TL;DR

This paper explores how POLR2A/RPB1, a key component of RNA polymerase II, drives cancer through transcriptional changes and non-coding RNA interactions, offering new therapeutic strategies.

## Contribution

The paper reveals novel mechanistic roles of POLR2A/RPB1 in transcriptional rewiring and non-coding RNA crosstalk in cancer.

## Key findings

- POLR2A/RPB1 dysregulation promotes oncogenesis through transcriptional reprogramming and evasion of apoptosis.
- Circular POLR2A isoforms modulate tumorigenic pathways by acting as miRNA sponges or protein scaffolds.
- Triptolide destabilizes RPB1, highlighting transcription-dependent vulnerabilities in drug-resistant cancers.

## Abstract

RNA polymerase II, together with its catalytic subunit RPB1 (encoded by POLR2A), forms the core of the eukaryotic transcriptional machinery that drives the synthesis of protein-coding and regulatory RNA transcripts. Accumulating evidence indicates that dysregulation of POLR2A/RPB1 is a critical driver of oncogenesis, promoting uncontrolled proliferation, evasion of apoptosis, and extensive transcriptional reprogramming across multiple malignancies, frequently affected by recurrent 17p deletions co-occurring with major tumor suppressor loss events. Such coordinated genomic alterations create transcriptional dependency that may be exploited therapeutically. Beyond its canonical role in transcription, POLR2A/RPB1 operates within an extensive regulatory network involving non-coding RNAs. Notably, circular RNAs derived from the POLR2A transcript have emerged as stable post-transcriptional regulators that modulate tumorigenic signaling pathways. In these roles, circular POLR2A isoforms promote proliferation, migration, and therapy resistance in glioblastoma and clear-cell renal cell carcinoma by acting as miRNA sponges or by scaffolding protein complexes that activate pathways such as ERK. These findings suggest that disturbances in POLR2A function reshape not only transcriptional output but also the broader non-coding RNA landscape, thereby reinforcing malignant phenotypes. Moreover, pharmacological agents such as triptolide further highlight transcription-dependent vulnerabilities by destabilizing RPB1, offering promising therapeutic opportunities, particularly in drug-resistant cancers. Collectively, POLR2A/RPB1 emerges as a central node linking transcriptional control, noncoding RNA biogenesis, and oncogenic signaling, positioning it as a compelling candidate for biomarker development and targeted therapeutic intervention.

## Linked entities

- **Genes:** POLR2A (RNA polymerase II subunit A) [NCBI Gene 5430]
- **Proteins:** POLR2A (RNA polymerase II subunit A), EPHB2 (EPH receptor B2)
- **Chemicals:** triptolide (PubChem CID 107985)
- **Diseases:** glioblastoma (MONDO:0018177), clear-cell renal cell carcinoma (MONDO:0005005)

## Full-text entities

- **Genes:** MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, POLR2A (RNA polymerase II subunit A) [NCBI Gene 5430] {aka NEDHIB, POLR2, POLRA, RPB1, RPBh1, RPO2}
- **Diseases:** glioblastoma (MESH:D005909), oncogenesis (MESH:D063646), clear-cell renal cell carcinoma (MESH:D002292), cancer (MESH:D009369)
- **Chemicals:** triptolide (MESH:C001899)

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12757387/full.md

## References

57 references — full list in the complete paper: https://tomesphere.com/paper/PMC12757387/full.md

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Source: https://tomesphere.com/paper/PMC12757387