# Network pharmacology analysis and experimental validation elucidate the protective mechanisms of BYHWD against hypoxia/reoxygenation-induced endothelial cell injury

**Authors:** Yan Shi, Qingnan Zhu, Yue Zhou, Qing Guan, Qingsi Wen, Yu Sun, Zewen Yan, Yuye Li, Yangjianing Zhao, Lu Liu, Hongli Lin, Dapeng Wang

PMC · DOI: 10.3389/fmed.2025.1704873 · Frontiers in Medicine · 2025-12-19

## TL;DR

This study uses network pharmacology and experiments to show how BYHWD protects against kidney injury by targeting specific genes and pathways.

## Contribution

The study integrates network pharmacology with in vitro and in vivo experiments to reveal how BYHWD protects against AKI via the PI3K/AKT/FOXO1 pathway.

## Key findings

- BYHWD improves endothelial cell survival and reduces apoptosis and oxidative stress in H/R injury models.
- Luteolin and quercetin in BYHWD bind to VEGFA and AKT1, activating the PI3K/AKT/FOXO1 pathway.
- BYHWD treatment in rats reduces renal dysfunction and histopathological damage in IRI-induced AKI.

## Abstract

Acute kidney injury (AKI) is a critical clinical condition with high mortality, and specific therapeutic drugs are currently lacking. Although Buyang Huanwu Decoction (BYHWD) has shown clinical efficacy against AKI, its underlying mechanisms remain unclear. This study integrated network pharmacology, in vitro experiments, and animal models to systematically elucidate the potential targets and signaling pathways of BYHWD in treating AKI, and to validate its protective effects on hypoxia/reoxygenation (H/R)-induced endothelial cell injury and renal ischemia-reperfusion injury (IRI) in vivo.

Active components and putative targets of BYHWD were screened using network pharmacology, and their intersections with AKI-related disease targets were identified. Protein-protein interaction (PPI) analysis, Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses, and molecular docking were performed. An in vitro H/R injury model was established using human umbilical vein endothelial cells (HUVECs). Cell counting kit-8 (CCK-8), trypan blue staining, flow cytometry, and Western blot were applied to assess the effects of BYHWD-containing serum on cell proliferation, apoptosis, oxidative stress, and the expression of proteins related to the VEGFRII/PI3K/AKT/FOXO1 pathway. For in vivo validation, a rat model of AKI was established via renal IRI. Rats were randomly divided into sham, IRI model, and BYHWD treatment groups. Renal function was assessed by measuring serum creatinine (SCr) and blood urea nitrogen levels. Renal histopathological changes were evaluated by hematoxylin and eosin (H&E) and Periodic Acid-Schiff staining.

Network pharmacology identified 133 active components in BYHWD and 210 overlapping drug-disease targets. PPI analysis revealed hub genes including VEGFA, AKT1, IL6, and TP53. KEGG enrichment analysis highlighted the PI3K-AKT signaling pathway as a central pathway. Molecular docking demonstrated stable binding of luteolin and quercetin to VEGFA. In vitro experiments confirmed that BYHWD-containing serum increased HUVECs viability, inhibited apoptosis, reduced ROS levels, and modulated the protein expression of Bax/Bcl-2, MCP-1, α-SMA, and CD31. Furthermore, BYHWD activated VEGFRII and the downstream PI3K/AKT/FOXO1 pathway. In animal experiments, BYHWD treatment significantly ameliorated renal dysfunction in IRI-induced AKI rats, as evidenced by decreased SCr and BUN levels. Histopathological examination showed that BYHWD attenuated tubular injury, necrosis, and cast formation.

BYHWD may alleviate H/R-induced endothelial cell injury by suppressing oxidative stress and apoptosis through active components such as luteolin and quercetin, which target key genes including VEGFA and AKT1, thereby activating the PI3K/AKT/FOXO1 signaling pathway. This study provides integrated experimental evidence from network pharmacology, in vitro, and in vivo studies, supporting the use of BYHWD in AKI treatment.

## Linked entities

- **Genes:** VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207], IL6 (interleukin 6) [NCBI Gene 3569], TP53 (tumor protein p53) [NCBI Gene 7157], BAX (BCL2 associated X, apoptosis regulator) [NCBI Gene 581], BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596], CCL2 (C-C motif chemokine ligand 2) [NCBI Gene 6347], ACTA1 (actin alpha 1, skeletal muscle) [NCBI Gene 58], PECAM1 (platelet and endothelial cell adhesion molecule 1) [NCBI Gene 5175], FOXO1 (forkhead box O1) [NCBI Gene 2308]
- **Proteins:** PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha), AKT1 (AKT serine/threonine kinase 1), VEGFA (vascular endothelial growth factor A), BAX (BCL2 associated X, apoptosis regulator), BCL2 (BCL2 apoptosis regulator), CCL2 (C-C motif chemokine ligand 2), ACTA1 (actin alpha 1, skeletal muscle), PECAM1 (platelet and endothelial cell adhesion molecule 1)
- **Chemicals:** luteolin (PubChem CID 5280445), quercetin (PubChem CID 5280343)
- **Diseases:** Acute kidney injury (MONDO:0002492), AKI (MONDO:0002492)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Bax (BCL2 associated X, apoptosis regulator) [NCBI Gene 24887], Pik3cb (phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta) [NCBI Gene 85243], Mcpt1l1 (mast cell protease 1-like 1) [NCBI Gene 100360872] {aka Mcpt1, rMCP-1, rMCP-I}, Vegfa (vascular endothelial growth factor A) [NCBI Gene 83785] {aka VEGF-A, VEGF111, VEGF164, VPF, Vegf}, Bcl2 (BCL2, apoptosis regulator) [NCBI Gene 24224] {aka Bcl-2}, Akt1 (AKT serine/threonine kinase 1) [NCBI Gene 24185] {aka Akt}, Pecam1 (platelet and endothelial cell adhesion molecule 1) [NCBI Gene 29583] {aka CD31, Pecam}, Tp53 (tumor protein p53) [NCBI Gene 24842] {aka Trp53, p53}, Foxo1 (forkhead box O1) [NCBI Gene 84482] {aka Fkhr, Foxo1a}, Il6 (interleukin 6) [NCBI Gene 24498] {aka ILg6, Ifnb2}
- **Diseases:** H/R injury (MESH:D000860), renal dysfunction (MESH:D007674), necrosis (MESH:D009336), IRI (MESH:D015427), tubular injury (MESH:D000230), AKI (MESH:D058186), Renal (MESH:D006030), R (MESH:C580424), endothelial cell injury (MESH:D055954), renal IRI (MESH:D007511)
- **Chemicals:** trypan blue (MESH:D014343), luteolin (MESH:D047311), urea nitrogen (MESH:C530477), creatinine (MESH:D003404), hematoxylin (MESH:D006416), H&amp;E (-), eosin (MESH:D004801), quercetin (MESH:D011794)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12757250/full.md

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12757250/full.md

## References

69 references — full list in the complete paper: https://tomesphere.com/paper/PMC12757250/full.md

---
Source: https://tomesphere.com/paper/PMC12757250