# Site-Selective Protein Modification via Peptide-Directed Proximity Catalysis

**Authors:** Laetitia Raynal, Joe Nabarro, Lisa M. Miller, Adam A. Dowle, Sophie L. Moul, Phathutshedzo Masithi, Steven D. Johnson, Martin A. Fascione, Christopher D. Spicer

PMC · DOI: 10.1021/acsomega.5c07883 · ACS Omega · 2025-12-18

## TL;DR

Researchers developed a method to modify specific sites on proteins using peptides with built-in catalysts, allowing for precise chemical changes.

## Contribution

The introduction of catalyst-functionalized peptides enables site-selective protein modification through proximity catalysis.

## Key findings

- Peptides with pyridinium oxime catalysts can modify proteins with N-acyl-N-alkylsulfonamide reagents.
- Changing the position of the catalyst in the peptide alters the modification site on the protein.
- This approach allows for the development of peptide libraries tailored to specific target proteins.

## Abstract

Proximity catalysis
exploits ligand binding for localized, catalytic
protein modification. In this work, we introduce catalyst-functionalized
peptides as versatile ligands for this approach. Through the functionalization
of target-binding peptides with pyridinium oxime catalysts, we show
that model proteins can be site-selectively modified with a variety
of N-acyl-N-alkylsulfonamide reagents
to introduce common functionalities, including fluorophores and affinity
handles to the protein surface. Critically, we show that simple changes
to the peptide-catalyst structure, moving the pyridinium oxime from
the N- to C-terminus, alter the site of modification. This opens up
possibilities to develop peptide libraries for a particular target
protein and subsequently tuning the modification site for a given
application.

## Linked entities

- **Chemicals:** pyridinium oxime (PubChem CID 135410029)

## Full-text entities

- **Chemicals:** peptides (MESH:D010455), N-acyl-N-alkylsulfonamide (-)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12756790/full.md

## References

26 references — full list in the complete paper: https://tomesphere.com/paper/PMC12756790/full.md

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Source: https://tomesphere.com/paper/PMC12756790