# Calcium signaling-mediated phosphorylation controls zinc allocation in Arabidopsis

**Authors:** Yanjun Fang, Fangru Liu, Chenyue Yang, Xuening Ma, Cun Wang, Zhenqian Zhang, Chuanfeng Ju

PMC · DOI: 10.1007/s44154-025-00276-z · Stress Biology · 2025-12-31

## TL;DR

The study reveals how calcium signaling controls zinc transport in Arabidopsis, offering a way to improve zinc-deficient crops.

## Contribution

The discovery of a CBL-CIPK-ZIP phosphorylation network regulating zinc allocation in plants is novel.

## Key findings

- CBL-CIPK complexes phosphorylate ZIP2's Ser190, essential for zinc transport activity.
- ZIP2 transports zinc between root columnar sheath cells.
- Phosphorylation of ZIP2 and ZIP12 improves zinc deficiency tolerance in plants.

## Abstract

Zinc (Zn) deficiency in soil can directly result in Zn deficiency in crops, subsequently causing Zn deficiency in humans. Currently, the physiological adaptation mechanisms by which plants respond to Zn deficiency have been fairly well characterized. However, the regulatory mechanisms governing Zn transport in plants remain poorly understood. In this study, we found that CBL1/4/5/8/9-CIPK3/9/23/26 complexes interact with the Zn transporter ZIP2 and phosphorylate its Ser190 residue. Biochemical analyses and complementation experiments in yeast and plants demonstrated that the Ser190 site is essential for the transport activity of ZIP2, and that the Zn transporter ZIP2 is involved in the transport of Zn between the columnar sheath cells in the roots. Notably, the hybrid complementation lines carrying CBL-CIPK-mediated phosphorylation sites of ZIP2 and ZIP12 exhibited enhanced tolerance to Zn deficiency. Overall, these findings suggest that CBL-CIPK-ZIP2/ZIP12 phosphorylation network coordinates Zn allocation in Arabidopsis, providing a potential target for improving Zn deficiency and developing Zn-enriched crop varieties.

The online version contains supplementary material available at 10.1007/s44154-025-00276-z.

## Linked entities

- **Genes:** cbl-1 (cystathionine gamma-lyase;plant cystathionine gamma-synthase) [NCBI Gene 172759], CBL4 (calcineurin B-like protein 4) [NCBI Gene 105118153], CBL5 (calcineurin B-like protein 5) [NCBI Gene 826671], CBL8 (calcineurin B-like protein 8) [NCBI Gene 842756], CBL9 (calcineurin B-like protein 9) [NCBI Gene 834756], CIPK3 (CBL-interacting protein kinase 3) [NCBI Gene 817240], CIPK9 (CBL-interacting protein kinase 9) [NCBI Gene 839349], CIPK23 (CBL-interacting protein kinase 23) [NCBI Gene 839907], CIPK26 (Ca2+regulated serine-threonine protein kinase family protein) [NCBI Gene 832246], SLC39A2 (solute carrier family 39 member 2) [NCBI Gene 29986], SLC39A12 (solute carrier family 39 member 12) [NCBI Gene 221074]
- **Chemicals:** Zinc (PubChem CID 23994), Zn (PubChem CID 23994)
- **Species:** Arabidopsis (taxon 3701)

## Full-text entities

- **Genes:** ZIP12 (zinc transporter 12 precursor) [NCBI Gene 836336] {aka AtZIP12, MTG10.20, MTG10_20, zinc transporter 12 precursor}, ZIP2 (ZRT/IRT-like protein 2) [NCBI Gene 836071] {aka AtZIP2, F2O15.25, F2O15_25, ZRT/IRT-like protein 2}, CBL (cystathionine beta-lyase) [NCBI Gene 824872] {aka cystathionine beta-lyase}
- **Diseases:** Zinc (MESH:C564286)
- **Chemicals:** Calcium (MESH:D002118), zinc (MESH:D015032)
- **Species:** Homo sapiens (human, species) [taxon 9606], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12756210/full.md

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12756210/full.md

## References

4 references — full list in the complete paper: https://tomesphere.com/paper/PMC12756210/full.md

---
Source: https://tomesphere.com/paper/PMC12756210