# Unraveling Obesity: A Five-Year Integrative Review of Transcriptomic Data

**Authors:** Svetlana Tarbeeva, Anna Kliuchnikova, Anna Kozlova, Elizaveta Sarygina, Ekaterina Ilgisonis, Elena Ponomarenko

PMC · DOI: 10.3390/ijms262210864 · International Journal of Molecular Sciences · 2025-11-09

## TL;DR

This paper reviews recent transcriptomic studies to identify key molecular mechanisms and potential biomarkers for obesity.

## Contribution

The study identifies three major molecular themes in obesity and emphasizes the need for standardized multi-omics approaches.

## Key findings

- Immune-inflammatory activation is linked to insulin resistance and visceral adiposity.
- Lipid and energy metabolism pathways are dysregulated in adipose tissue and liver.
- Epigenetic and post-transcriptional regulation plays a significant role in obesity mechanisms.

## Abstract

Omics approaches have advanced insight into molecular mechanisms of human obesity. We reviewed transcriptomic studies published between January 2020 and June 2025 that used human tissues or human cell lines and applied high-throughput RNA methods. Across these works three convergent themes emerged: (1) immune–inflammatory activation—particularly interferon-stimulated and innate immune signatures—linked to insulin resistance and visceral adiposity; (2) dysregulation of lipid and energy-metabolism pathways, including reduced lipolysis and β-oxidation in adipose tissue and liver; and (3) epigenetic and post-transcriptional regulation mediated by DNA methylation, histone modification, long noncoding RNAs, microRNAs and circular RNAs. Multi-omics integration (transcriptome with proteome, metabolome and microbiome) improved mechanistic interpretation and biomarker discovery but was limited by cohort heterogeneity and technical variation. We conclude that standardized, integrative multi-omics analyses in well-characterized, longitudinal human cohorts are required to translate molecular signatures into robust biomarkers and personalized therapeutic strategies for obesity.

## Linked entities

- **Diseases:** obesity (MONDO:0011122)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Diseases:** inflammatory (MESH:D007249), insulin resistance (MESH:D007333), visceral adiposity (MESH:D007418), Obesity (MESH:D009765)
- **Chemicals:** lipid (MESH:D008055)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## References

42 references — full list in the complete paper: https://tomesphere.com/paper/PMC12652754/full.md

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Source: https://tomesphere.com/paper/PMC12652754