# Is the TEX11-.652del237bp Exonic In-Frame Deletion Variant Associated with Azoospermia? The Results of an In Vitro and In Silico Study

**Authors:** Morgane Le Beulze, Dorothée Poidatz, Marie Francisco, François-Xavier Madec, Pierre-Henri Benetti, Gabriel Livera, François Vialard

PMC · DOI: 10.3390/genes16111270 · Genes · 2025-10-28

## TL;DR

This study investigates whether a specific genetic deletion in the TEX11 gene is linked to male infertility by analyzing its effects in human cells and using computer models.

## Contribution

The study functionally validates the TEX11-c.652del237bp variant in human cells and explores species-specific differences in TEX11 function.

## Key findings

- The TEX11-c.652del237bp deletion leads to truncated mRNA and protein production in human cells.
- The deletion does not significantly impact the ZZS complex according to in silico modeling.
- Mouse models with the deletion remain fertile, suggesting species-specific differences in TEX11 function.

## Abstract

Background: In 2015, it was discovered that mutations in the TEX11 gene are associated with azoospermia in general and meiotic maturation arrest in particular. TEX11 is a component of the ZZS complex (comprising Zip2-, Zip4- and Spo16 and originally described in Saccharomyces cerevisiae). During meiosis, this complex is required for the promotion of double-strand break (DSB) repair and thus the maintenance of genomic integrity. Since the initial discovery, several variants and deletions in TEX11 have been reported in patients with spermatogenesis defects. However, many of these new variants have not been functionally validated, which makes it difficult to confirm their direct impact on meiosis. The exonic in-frame deletion TEX11-c.652del237bp has been recurrently identified in infertile men. However, mice models carrying this deletion remain fertile—suggesting that these models may not faithfully replicate human meiotic phenotypes. To address this discrepancy, we functionally validated the TEX11-c.652del237bp variant in vitro. Methods: After amplification in Escherichia Coli DH5α, the pIRES2-EGFP plasmid containing either the wild-type TEX11 sequence or the TEX11-c.652del237bp sequence was transfected into the HEK293 human embryonic kidney cell line. qPCR and Western blot analyses were then used to evaluate the presence and expression levels of TEX11 mRNA and TEX11 protein. Results: The qPCR and Western blot analyses showed that truncated mRNA and protein were produced in cells transfected with the c.652del237bp variant. Hence, the deletion probably leads to the transcription and translation of TEX11 in human testis. Furthermore, in silico modeling suggested that the deletion does not have a significant impact on the ZZS complex. Conclusions: Our in vitro and in silico data demonstrate that the c.652del237bp in-frame deletion results in a truncated TEX11 protein and thus question the deletion’s pathogenic role in human meiosis. However, the absence of a meiotic phenotype in the corresponding mouse model is suggestive of species-specific differences in TEX11 endogenous function. Further studies (such as co-immunoprecipitation experiments with other ZZS complex proteins) are needed to fully assess the functional impact of TEX11-c.652del237bp. These experiments might also provide novel insights into the specific role of the TEX11 SPO22 domain in human spermatogenesis.

## Linked entities

- **Genes:** TEX11 (testis expressed 11) [NCBI Gene 56159]
- **Proteins:** TEX11 (testis expressed 11), SLC39A2 (solute carrier family 39 member 2), SLC39A4 (solute carrier family 39 member 4), C1orf146 (chromosome 1 open reading frame 146)
- **Diseases:** azoospermia (MONDO:0100459)
- **Species:** Saccharomyces cerevisiae (taxon 4932), Mus musculus (taxon 10090), Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** TEX11 (testis expressed 11) [NCBI Gene 56159] {aka MZIP4, SPGFX2, Spo22, TGC1, TSGA3, ZIP4}, SLC39A2 (solute carrier family 39 member 2) [NCBI Gene 29986] {aka 6A1, ETI-1, ZIP-2, ZIP2}, SLC39A4 (solute carrier family 39 member 4) [NCBI Gene 55630] {aka AEZ, AWMS2, ZIP4}
- **Diseases:** spermatogenesis defects (MESH:C536875), Azoospermia (MESH:D053713)
- **Species:** Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** c.652del237bp
- **Cell lines:** DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531), HEK293 — Homo sapiens (Human), Transformed cell line (CVCL_0045)

## Full text

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## Figures

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## References

22 references — full list in the complete paper: https://tomesphere.com/paper/PMC12652577/full.md

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Source: https://tomesphere.com/paper/PMC12652577