# FCER1A Downregulation in Infectious Pneumonia: A Multi-Modal Study Combining Bioinformatics, Animal Models, and Reverse Pharmacology

**Authors:** Yuan Cai, Xiaolong Feng, Mengxiong Xiao, Qian Li, Xinru Tao, Penghui Li

PMC · DOI: 10.3390/genes16111294 · Genes · 2025-10-31

## TL;DR

This study identifies FCER1A as a key gene in infectious pneumonia and suggests tectorigenin as a potential treatment.

## Contribution

FCER1A is newly identified as a diagnostic biomarker and potential drug target for infectious pneumonia.

## Key findings

- FCER1A is significantly downregulated in infectious pneumonia patients and validated in a mouse model.
- Tectorigenin shows superior binding affinity to FCER1A compared to pyrogallol in molecular simulations.

## Abstract

Background: Infectious pneumonia remains a major global health challenge with high morbidity and mortality, especially among vulnerable groups. Current diagnostic approaches lack sufficient specificity and accuracy. This study aimed to identify core diagnostic genes, explore their biological functions, and predict potential natural compounds targeting these genes to improve diagnostic and therapeutic strategies. Methods: Gene expression profiles from the GEO database (GSE103119) were analyzed to identify differentially expressed genes (DEGs). Hub genes were selected by integrating protein–protein interaction (PPI) networks and multiple machine learning algorithms. Expression patterns of the identified hub gene were validated in a murine pneumonia model. Reverse network pharmacology was applied to screen natural compounds, followed by molecular docking and molecular dynamics simulations to evaluate binding affinity and complex stability. Results: A total of 2550 DEGs were identified. FCER1A was consistently determined as a hub gene through PPI and machine learning analyses, showing significant downregulation in infectious pneumonia patients. Animal experiments confirmed pronounced reduction of Fcer1a transcription in both lung tissue and whole blood of pneumonia model mice. Two natural compounds, pyrogallol and tectorigenin, were identified as potential ligands for FCER1A. Molecular simulations confirmed stable binding with the target protein, with tectorigenin exhibiting superior binding affinity. Conclusions: This study proposes FCER1A as a promising diagnostic biomarker for infectious pneumonia and suggests tectorigenin as a candidate compound for further therapeutic development.

## Linked entities

- **Genes:** FCER1A (Fc epsilon receptor Ia) [NCBI Gene 2205]
- **Chemicals:** pyrogallol (PubChem CID 1057), tectorigenin (PubChem CID 5281811)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Fcer1a (Fc receptor, IgE, high affinity I, alpha polypeptide) [NCBI Gene 14125] {aka FcERI, Fce1a, Fcr-5, fcepsilonri}
- **Diseases:** Infectious Pneumonia (MESH:D011014)
- **Chemicals:** tectorigenin (MESH:C120039), pyrogallol (MESH:D011748)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12652099/full.md

## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12652099/full.md

## References

43 references — full list in the complete paper: https://tomesphere.com/paper/PMC12652099/full.md

---
Source: https://tomesphere.com/paper/PMC12652099