# All-Trans Retinoic Acid Impacts Early Palatal Shelves Development via the Wnt and TGF-β Signaling Pathways

**Authors:** Yaping Ma, Binqing Wang, Shikang Gao, Tao Song

PMC · DOI: 10.3390/biomedicines13112836 · 2025-11-20

## TL;DR

This study explores how all-trans retinoic acid causes cleft palate by affecting cell development through Wnt and TGF-β pathways.

## Contribution

The study identifies Ppp1r14b as a key gene in atRA's effect on palatal shelves via Wnt and TGF-β pathways.

## Key findings

- AtRA inhibits proliferation and migration of mesenchymal and epithelial cells in palatal shelves.
- Wnt and TGF-β signaling pathways are modulated by atRA exposure.
- Ppp1r14b gene is a critical mediator in atRA's interaction with these pathways.

## Abstract

Background/Objectives: All-trans retinoic acid (atRA), a potent derivative of vitamin A, is recognized as a significant teratogen for inducing cleft palate in both humans and mice. The molecular mechanisms underlying it remain intricate and incompletely elucidated. The advent of single-cell sequencing technology offers novel methodologies to investigate the mechanisms by which atRA induces cleft palate. Methods: In this study, we use C57BL/6 mice to conduct cleft palate models, comprising a control group and an atRA-exposed group. Palatal shelves were collected at embryonic day 12.5 (E12.5) for 10x single-cell sequencing analysis to discern and compare the cellular and molecular disparities between the two groups. Validation of the findings was performed using Quantitative real-time polymerase chain reaction and Western blot techniques. Results: The findings indicate that at E12.5, atRA predominantly affects the mesenchymal and epithelial cells of the palatal shelves, inhibiting cellular proliferation and migration. The primary mechanism of atRA’s effect involves modulation of the Wnt and TGF-β signaling pathways. Furthermore, the Ppp1r14b gene was identified as a critical mediator in atRA’s interaction with these pathways. Conclusions: This study provides a more comprehensive understanding of the mechanisms underlying atRA-induced cleft palate formation. It highlights the significance of the Wnt and TGF-β pathways, as well as the Ppp1r14b gene during this procedure.

## Linked entities

- **Genes:** PPP1R14B (protein phosphatase 1 regulatory inhibitor subunit 14B) [NCBI Gene 26472]
- **Chemicals:** all-trans retinoic acid (PubChem CID 444795), vitamin A (PubChem CID 445354)
- **Diseases:** cleft palate (MONDO:0016064)

## Full-text entities

- **Genes:** Tgfb1 (transforming growth factor, beta 1) [NCBI Gene 21803] {aka TGF-beta1, TGFbeta1, Tgfb, Tgfb-1}, Ppp1r14b (protein phosphatase 1, regulatory inhibitor subunit 14B) [NCBI Gene 18938] {aka AOM172, PHI-1, PLCB3N, Png}
- **Diseases:** cleft palate (MESH:D002972)
- **Chemicals:** vitamin A (MESH:D014801), All-Trans Retinoic Acid (MESH:D014212)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12650183/full.md

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Source: https://tomesphere.com/paper/PMC12650183