# Explainable AI unravels sepsis heterogeneity via coagulation-inflammation profiles for prognosis and stratification

**Authors:** Li Zhu, Zengtian Chen, Hong Zhang, Hongjun Chen, Lanqi Liu, Wei Yu, Kai Wu, Yijin Chen, Xingyu Tao, Zefeng Yu, Linhui Shi, Jialian Wang, Fan Zhang, Jiaying Shen, Fen Liu, Chongke Hu, Yangguang Ren, Tzu-Ming Liu, Yang Luo, Fei Guo, Bailin Niu

PMC · DOI: 10.1038/s41467-025-65365-z · Nature Communications · 2025-11-24

## TL;DR

Explainable AI models help predict sepsis outcomes and identify patient subgroups based on coagulation and inflammation profiles.

## Contribution

The novel SepsisFormer and SMART tools use coagulation-inflammation profiles for accurate sepsis prognosis and stratification.

## Key findings

- SepsisFormer achieved high predictive accuracy (AUC: 0.9301) in a multi-center study of 12,408 patients.
- SMART outperformed existing scoring systems for risk stratification (AUC: 0.7360).
- Two subphenotypes (CIS1 and CIS2) and four risk levels were identified with distinct clinical outcomes.

## Abstract

Sepsis is a leading cause of hospital mortality, and its significant heterogeneity complicates prognosis and stratification. To address this challenge, we developed an explainable artificial intelligence prognostic model (SepsisFormer, a transformer-based neural network) and an automated risk-stratification tool (SMART) for sepsis. In a multi-center retrospective study of 12,408 sepsis patients, SepsisFormer achieved high predictive accuracy (AUC: 0.9301, sensitivity: 0.9346, and specificity: 0.8312). SMART (AUC: 0.7360) surpassed most established scoring systems. Seven coagulation-inflammatory routine laboratory measurements and patient age were identified to classify patients’ four risk levels (mild, moderate, severe, dangerous) and two subphenotypes (CIS1 and CIS2), each with distinct clinical characteristics and mortality rates. Notably, patients with moderate/severe levels or CIS2 derive more significant benefits from anticoagulant treatment. Our work, therefore, offers a set of simple, real-time executable tools for sepsis heterogeneity, demonstrating the potential to enhance sepsis clinical practice globally, particularly in resource-constrained healthcare settings.

Sepsis’s profound heterogeneity complicates prognosis and stratification. Here, the authors show that SepsisFormer and SMART, explainable AI models integrating coagulation–inflammation markers, enable outcome prediction, real-time risk assessment, and subgroup identification to guide sepsis therapy.

## Full-text entities

- **Genes:** SOCS2 (suppressor of cytokine signaling 2) [NCBI Gene 8835] {aka CIS2, Cish2, SOCS-2, SSI-2, SSI2, STATI2}
- **Diseases:** inflammation (MESH:D007249), Sepsis (MESH:D018805), coagulation (MESH:D001778)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

7 references — full list in the complete paper: https://tomesphere.com/paper/PMC12644763/full.md

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Source: https://tomesphere.com/paper/PMC12644763