# CDK12 regulates cellular metabolism to promote glioblastoma growth

**Authors:** Jeong-Yeon Mun, Chang Shu, Qiuqiang Gao, Zhe Zhu, Hasan O. Akman, Mike-Andrew Westhoff, Georg Karpel-Massler, Markus D. Siegelin

PMC · DOI: 10.1172/jci.insight.190780 · JCI Insight · 2025-09-25

## TL;DR

Blocking CDK12 disrupts cancer cell metabolism and improves treatment outcomes in aggressive brain tumors.

## Contribution

CDK12 is identified as a novel therapeutic target in glioblastoma through its regulation of metabolism and synergy with temozolomide.

## Key findings

- CDK12 inhibition impairs tumor growth and enhances temozolomide efficacy in glioblastoma models.
- CDK12 regulates mitochondrial respiration and energy metabolism via the GSK3β/PPARD axis.
- Combined CDK12 inhibition and temozolomide eradicates tumors in all tested animals.

## Abstract

Glioblastoma IDH-wildtype is the most common and aggressive primary brain tumor in adults, with poor prognosis despite current therapies. To identify new therapeutic vulnerabilities, we investigated the role of CDK12, a transcription-associated cyclin-dependent kinase, in glioblastoma. Genetic or pharmacologic inactivation of CDK12 impaired tumor growth in patient-derived xenograft (PDX) models and enhanced the efficacy of temozolomide. Metabolic profiling using extracellular flux analysis and stable isotope tracing with U-¹³C-glucose and U-¹³C-glutamine showed that CDK12 inhibition disrupted mitochondrial respiration, resulting in energy depletion and apoptotic cell death characterized by caspase activation and Noxa induction. Mechanistically, we identified a direct interaction between CDK12 and GSK3β. CDK12 inhibition activated GSK3β, leading to downregulation of PPARD, a transcriptional regulator of oxidative metabolism. This CDK12/GSK3β/PPARD axis was required for glioblastoma cell proliferation and metabolic homeostasis. In vivo, CDK12 inhibition significantly extended survival without overt toxicity and induced complete tumor regression in a subset of animals. Strikingly, combined CDK12 inhibition and temozolomide treatment led to complete tumor eradication in all animals tested. These findings establish CDK12 as a key regulator of glioblastoma metabolism and survival, and provide strong preclinical rationale for its therapeutic targeting in combination with standard-of-care treatments.

Targeting the protein CDK12 is a promising therapeutic approach for glioblastoma. This approach significantly prolongs survival and can completely eliminate tumors when combined with standard treatment in mouse models.

## Linked entities

- **Genes:** CDK12 (cyclin dependent kinase 12) [NCBI Gene 51755], GSK3B (glycogen synthase kinase 3 beta) [NCBI Gene 2932], PPARD (peroxisome proliferator activated receptor delta) [NCBI Gene 5467], PMAIP1 (phorbol-12-myristate-13-acetate-induced protein 1) [NCBI Gene 5366]
- **Proteins:** CDK12 (cyclin dependent kinase 12), GSK3B (glycogen synthase kinase 3 beta), PPARD (peroxisome proliferator activated receptor delta)
- **Chemicals:** temozolomide (PubChem CID 5394)
- **Diseases:** glioblastoma (MONDO:0018177)

## Full-text entities

- **Genes:** IDH1 (isocitrate dehydrogenase (NADP(+)) 1) [NCBI Gene 3417] {aka HEL-216, HEL-S-26, IDCD, IDH, IDP, IDPC}, CDK12 (cyclin dependent kinase 12) [NCBI Gene 51755] {aka CRK7, CRKR, CRKRS}, PPARD (peroxisome proliferator activated receptor delta) [NCBI Gene 5467] {aka FAAR, NR1C2, NUC1, NUCI, NUCII, PPARB}, GSK3B (glycogen synthase kinase 3 beta) [NCBI Gene 2932], PMAIP1 (phorbol-12-myristate-13-acetate-induced protein 1) [NCBI Gene 5366] {aka APR, NOXA}
- **Diseases:** tumor (MESH:D009369), toxicity (MESH:D064420), brain tumor (MESH:D001932), Glioblastoma (MESH:D005909)
- **Chemicals:** temozolomide (MESH:D000077204), U-13C-glucose (-)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12643520/full.md

## References

64 references — full list in the complete paper: https://tomesphere.com/paper/PMC12643520/full.md

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Source: https://tomesphere.com/paper/PMC12643520