# Protocol to Establish Estrogen Receptor-Negative Heterozygous BRCA1 Organoids

**Authors:** Madhura Deshpande, Jeannine Gerhardt

PMC · DOI: 10.3390/mps8060127 · Methods and Protocols · 2025-11-01

## TL;DR

This paper describes a protocol to create breast organoids with a BRCA1 mutation and no estrogen receptors, helping study how cancer develops in these cells.

## Contribution

The novel contribution is a protocol for generating ER/PR/HER2-negative breast organoids with a BRCA1 germline mutation.

## Key findings

- The organoids are unresponsive to estrogen and express the stem/progenitor marker CD44.
- The organoids contain outgrowths resembling mature ductal and lobular mammary gland units.

## Abstract

Cancer development in BRCA1 carriers is a multi-step process, which is triggered by several factors and mechanisms that are not clearly understood. Most BRCA1 carriers develop triple-negative breast cancer (TNBC)—estrogen receptor (ER)-, progesterone receptor (PR)-, and HER2 -negative cancers—which originates from ER/PR/HER2-negative breast progenitor cells. Due to a lack of ER/PR/HER2-negative cell models with BRCA mutations, the processes inducing cancer development in BRCA carriers have not been comprehensively studied. Thus, studies characterizing ER/PR/HER2-negative cells carrying a BRCA1 germline mutation are needed to gain more in-depth knowledge about the steps leading to cancer initiation in BRCA1 carriers. To study the cancer development in these patients, we established a protocol for the generation of human ER/PR/HER2-negative breast organoids carrying a BRCA1 germline mutation. We confirmed that these organoids are unresponsive to estrogen, can self-renew, and express the stem/progenitor marker CD44. In addition, we observed that these organoids contain outgrowths that resemble the mature ductal and lobular units of the mammary gland, thus making it a suitable model system to study how cancer develops in ER/PR/HER2-negative mammary cells that carry a BRCA1 germline mutation.

## Linked entities

- **Genes:** BRCA1 (BRCA1 DNA repair associated) [NCBI Gene 672]
- **Proteins:** ERBB2 (erb-b2 receptor tyrosine kinase 2), CD44 (CD44 molecule (IN blood group))
- **Diseases:** triple-negative breast cancer (MONDO:0005494), breast cancer (MONDO:0004989)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** BRCA1 (BRCA1 DNA repair associated) [NCBI Gene 672] {aka BRCAI, BRCC1, BROVCA1, FANCS, IRIS, PNCA4}, PGR (progesterone receptor) [NCBI Gene 5241] {aka NR3C3, PR}, CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960] {aka CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL}, ESR1 (estrogen receptor 1) [NCBI Gene 2099] {aka ER, ESR, ESRA, ESTRR, Era, NR3A1}, ERBB2 (erb-b2 receptor tyrosine kinase 2) [NCBI Gene 2064] {aka CD340, HER-2, HER-2/neu, HER2, MLN 19, MLN-19}, EREG (epiregulin) [NCBI Gene 2069] {aka EPR, ER, Ep}
- **Diseases:** Cancer (MESH:D009369), TNBC (MESH:D064726)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC12641787/full.md

## References

16 references — full list in the complete paper: https://tomesphere.com/paper/PMC12641787/full.md

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Source: https://tomesphere.com/paper/PMC12641787