# Genomic analysis highlights the conservation significance of Torenia concolor (Linderniaceae) from the periphery of its distribution range

## TL;DR

A genomic study shows that a rare plant population on Amami Oshima Island is naturally occurring and genetically unique, supporting its conservation importance.

## Contribution

The study provides genomic evidence that a regionally rare Torenia concolor population is naturally derived and phylogenetically distinct.

## Key findings

- The Amami Oshima Torenia concolor population is phylogenetically unique and naturally distributed.
- The population retains comparable genetic diversity to more abundant populations without increased deleterious mutations.
- The population may be sustainably conserved with minimal intervention due to its genetic robustness.

## Abstract

Biodiversity status assessments are typically conducted on a regional basis. Consequently, there are numerous species that are rare in one region but ubiquitously present in another country or administrative region. Correctly assessing the conservation status and value of such “endangered species” is essential to achieve better biodiversity conservation through the appropriate and efficient use of socioeconomic resources. A comparative genomic analysis was conducted on Torenia concolor, which is widely distributed in Southeast and East Asia, but has a limited population in Japan, specifically on Amami Oshima Island. This population has not yet been established as a conservation priority due to the possibility that it may have originated from cultivated plants. We hypothesized that the population was not due to a human-induced distribution; indeed, our findings indicate that the Amami Oshima population is derived from a natural distribution and is phylogenetically unique, retaining comparable genetic diversity with more abundant populations and exhibiting no increase in deleterious variations in their genome. These findings highlight the unique conservation significance of the Amami Oshima population. Furthermore, the findings suggest that this population, being genetically robust, may be sustainably conserved through minimal intervention strategies, such as maintaining current habitat conditions and monitoring population size, as the accumulation of deleterious mutations is comparable to that of the Taiwanese population. This study highlights the importance of accurate assessment of genomic status and contributes to a broader understanding of conservation strategies for regionally rare species.

The online version contains supplementary material available at 10.1007/s10265-025-01659-z.