# Disinfection of Hospital Sink Drains Enriches Pseudomonadota and Efflux Pump-Mediated Antibiotic Resistance in Reestablished Biofilms

**Authors:** Kate Bowie, Irvan Luhung, Taylor Burke, Scott Roberts, Richard Martinello, Mark Gerstein, Jordan Peccia, Hannah Healy

PMC · DOI: 10.21203/rs.3.rs-7888495/v1 · Research Square · 2025-10-27

## TL;DR

Hospital sink disinfection leads to regrowth of antibiotic-resistant biofilms dominated by Pseudomonadota and increased efflux pump genes.

## Contribution

Shows that disinfection enriches Pseudomonadota and efflux pump-mediated resistance in regrown sink drain biofilms.

## Key findings

- Drain biofilms regrew to baseline density within four days after disinfection.
- Regrown biofilms were dominated by Pseudomonadota, including Cupriavidus and Pseudomonas.
- Long-read sequencing showed increased multidrug efflux pump genes after disinfection.

## Abstract

Antimicrobial resistant pathogens and associated infections represent major public health threats affecting healthcare facilities, with sink drain biofilms serving as reservoirs for many of these bacteria. Despite attempts at sink drain biofilm disinfection and removal, drain biofilms inevitably regrow, and disinfection may shape the returning microbial communities and their resistance profiles. We applied culture-based and metagenomic approaches to study these drain disinfection effects on microbial community abundance, taxonomy, and antimicrobial resistance in operational hospital sinks. Drain biofilms regrew to baseline densities in approximately four days. Regrown biofilms contained more viable carbapenem-resistant bacteria and were dominated by Pseudomonadota, including Cupriavidus and Pseudomonas. Long-read sequencing revealed an increase in multidrug efflux pump genes after disinfection, which confer broad resistance to antibiotics and disinfectants. This work provides mechanistic insights into how disinfection influences sink drain biofilm ecology and the enrichment of antimicrobial resistance, with implications for infection prevention strategies in healthcare environments.

## Linked entities

- **Species:** Pseudomonadota (taxon 1224), Cupriavidus (taxon 106589), Pseudomonas (taxon 286)

## Full-text entities

- **Diseases:** infection (MESH:D007239)
- **Chemicals:** carbapenem (MESH:D015780)
- **Species:** Pseudomonas (RNA similarity group I, genus) [taxon 286]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12636743/full.md

## References

68 references — full list in the complete paper: https://tomesphere.com/paper/PMC12636743/full.md

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Source: https://tomesphere.com/paper/PMC12636743