# The Metabolome Atlas of 22 Tissues in Aging Mice Reveals a Switch in Thermogenesis from Brown Fat to Skeletal Muscle

**Authors:** Oliver Fiehn, Min Liu, Jian Ji, Anthony David, Huaxu Yu, Tong Shen, Yuanyue Li, Lydia Yang

PMC · DOI: 10.21203/rs.3.rs-7811947/v1 · Research Square · 2025-10-29

## TL;DR

Aging mice shift thermogenesis from brown fat to muscle, causing metabolic changes and muscle stress.

## Contribution

A comprehensive metabolome atlas of aging mice reveals a thermogenic shift from brown fat to skeletal muscle.

## Key findings

- Aging mice show reduced brown fat thermogenesis and increased thermogenic activity in skeletal muscle.
- Aged muscles exhibit signs of stress and damage due to compensatory thermogenesis.
- Metabolomic changes include altered lipid metabolism and stress markers in skeletal muscle.

## Abstract

Aging impairs thermoregulatory capacity, yet the metabolic mechanisms remain unclear. We report an organ-resolved metabolome atlas of 2,875 structurally annotated metabolites of old (90–96 weeks) versus young mice (16 weeks) across 22 tissues and four biological matrices. For thermoregulation, aging induces widespread remodeling of mitochondrial cardiolipins, with severe depletion of nascent species in brown adipose tissue (BAT) and a compensatory shift in thermogenic workload from BAT to muscle, evidenced by higher levels of long-chain fatty acids, acylcarnitines, and ω-oxidation markers in quadriceps. BAT showed reduced lipolysis and lower levels of the thermogenic lipokine 12,13-DiHOME, whereas muscle exhibited increased 12,13-DiHOME, lipid uptake, β-oxidation, and stress-associated metabolites including oxidized/reduced glutathione ratio. Hence, thermogenic adaptation comes at a cost: aged muscles exhibited signs of proteostatic stress, energetic strain, and oxidative damage, suggesting compensation contributes to sarcopenia. The atlas is publicly available at GitHub https://github.com/minliuUCDavis/AgingMiceAtlas and serves as a cornerstone resource for aging biology.

## Linked entities

- **Chemicals:** 12,13-DiHOME (PubChem CID 5282961), glutathione (PubChem CID 124886)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Diseases:** sarcopenia (MESH:D055948)
- **Chemicals:** cardiolipins (MESH:D002308), 12,13-DiHOME (-), glutathione (MESH:D005978), lipid (MESH:D008055), acylcarnitines (MESH:C116917)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12636714/full.md

## References

44 references — full list in the complete paper: https://tomesphere.com/paper/PMC12636714/full.md

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Source: https://tomesphere.com/paper/PMC12636714