# Puribacter membranae gen. nov., sp. nov., isolated from a biofilm of a membrane bioreactor (MBR) treating sewage

**Authors:** Masashi Hatamoto

PMC · DOI: 10.1099/ijsem.0.006978 · International Journal of Systematic and Evolutionary Microbiology · 2025-11-20

## TL;DR

Scientists discovered a new species of bacteria, Puribacter membranae, from a sewage treatment system in Japan.

## Contribution

The paper introduces a new bacterial genus and species based on genomic and phenotypic analysis.

## Key findings

- The new species is phylogenetically related to the family Burkholderiaceae but distinct from known genera.
- Genomic data confirmed its novelty with low ANI and dDDH values to related taxa.
- Phenotypic traits like quinone and fatty acid profiles support its classification as a new species.

## Abstract

Novel Gram-stain-negative, non-spore-forming, non-motile rods, designated HTMS2 and HTMS3T, were isolated from a biofilm on the membrane of a municipal sewage treatment membrane bioreactor in Nagaoka, Japan. Phylogenetic analysis of 16S rRNA genes placed them in the family Burkholderiaceae, most closely related to Hydromonas duriensis A2P5 T (94.14% similarity). Genome sequencing (2.52 Mb, 48.2% G+C) and phylogenomic analysis affiliated them with the uncultured genus lineage CTSOIL-112 in the Genome Taxonomy Database. Average nucleotide identity (ANI) and digital DNA–DNA hybridization (dDDH) values to related taxa were below species thresholds (ANI ≤77.0%, dDDH ≤54.9%). In addition, average amino acid identity values to related taxa were ≤68.6%. Both strains are catalase- and oxidase-positive, reduced nitrate and utilized various carbohydrates but not N-acetyl-glucosamine; they differed in sorbitol assimilation. The major respiratory quinone is Q-8, and the predominant fatty acids are summed feature 3 (C_16:1 ω7c/ω6c), summed feature 8 (C_18:1 ω7c/ω6c) and C_16:0. Genomic data supported a non-motile, Gram-stain-negative phenotype. Polyphasic analysis indicates that these strains represent a novel genus and species, Puribacter membranae gen. nov., sp. nov. (type strain HTMS3T=NBRC 117344T=LMG 34133T).

## Linked entities

- **Genes:** 16S rRNA (16S ribosomal RNA) [NCBI Gene 2597965]
- **Chemicals:** nitrate (PubChem CID 943), N-acetyl-glucosamine (PubChem CID 439174), sorbitol (PubChem CID 5780)
- **Species:** Puribacter membranae (taxon 3415978), Burkholderiaceae (taxon 119060)

## Full-text entities

- **Genes:** CAT (catalase) [NCBI Gene 847]
- **Chemicals:** C_16:0 (-), carbohydrates (MESH:D002241), N-acetyl-glucosamine (MESH:D000117), quinone (MESH:C004532), fatty acids (MESH:D005227), sorbitol (MESH:D013012), nitrate (MESH:D009566)
- **Cell lines:** HTMS3 — Mus musculus (Mouse), Hybridoma (CVCL_C6V6)

## Full text

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## Figures

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## References

31 references — full list in the complete paper: https://tomesphere.com/paper/PMC12634028/full.md

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Source: https://tomesphere.com/paper/PMC12634028