# The complete chloroplast genome sequence and phylogenetic analysis of Viola grayi (Violaceae)

**Authors:** Ah-reum Go, Yayoi Takahashi, Takaya Iwasaki, Ki-Oug Yoo

PMC · DOI: 10.1080/23802359.2025.2566072 · 2025-11-19

## TL;DR

This paper presents the first complete chloroplast genome of Viola grayi and uses it to explore its evolutionary relationships within the Viola genus.

## Contribution

The study provides the first complete chloroplast genome sequence for Viola grayi and clarifies its phylogenetic placement.

## Key findings

- The chloroplast genome of Viola grayi is 158,408 bp in length with typical structural features.
- Phylogenetic analysis shows Viola is monophyletic and places V. grayi closely related to V. grypoceras.
- The genome serves as a valuable resource for future evolutionary and taxonomic studies in Viola.

## Abstract

Viola grayi, a caulescent species in subsection Rostratae, adapted to coastal dunes, with leathery leaves, is here reported with its first sequenced complete chloroplast genome (158,408 bp), comprising a large single-copy (86,662 bp), a small single-copy (17,994 bp), and pair of inverted repeats (26,876 bp each). Phylogenetic analysis of 22 Viola species, based on a 184,817 bp whole-plastome alignment, resolved the genus as monophyletic and placed V. grayi in a clade with V. grypoceras (BP = 100). This plastome provides a valuable genomic resource for future comparative, taxonomic, phylogenetic, and evolutionary studies.

## Linked entities

- **Species:** Viola grayi (taxon 502513), Viola grypoceras (taxon 316475), Viola (taxon 13757)

## Full-text entities

- **Species:** Viola grayi (iso-sumire, species) [taxon 502513], Viola (genus) [taxon 509528]

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12632236/full.md

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Source: https://tomesphere.com/paper/PMC12632236