# Stress-Associated Changes in MiR-20b-3p as a Potential Predictor of Underlying Psychopathology in the Depressed Brain: Mechanistic Insights from a Rat Model of Chronic Restraint Stress

**Authors:** Sarah Ali, Yogesh Dwivedi

PMC · DOI: 10.1007/s12035-025-05309-2 · Molecular Neurobiology · 2025-11-15

## TL;DR

This study explores how chronic stress affects gene regulation in the brain, identifying miR-20b-3p as a potential predictor of depression-related changes.

## Contribution

The study identifies miR-20b-3p as a novel regulator of NR3C1 in the context of chronic stress and depression.

## Key findings

- Chronic restraint stress significantly downregulates CRHR2 and NR3C1 in the prefrontal cortex.
- miR-20b-3p and miR-425-3p are significantly upregulated in the stressed group.
- miR-20b-3p interacts with NR3C1, regulating its expression in a stress-dependent manner.

## Abstract

Major depressive disorder (MDD) is strongly linked to chronic stress, yet its molecular mechanisms remain poorly understood. We hypothesize that chronic stress induces epigenetic alterations in stress-associated genes, contributing to transcriptional dysregulation in the prefrontal cortex (PFC), a key brain region implicated in MDD. To test this, we performed expression levels of stress-associated genes in the PFC of rats subjected to restraint stress, which revealed significant downregulation of CRHR2 and NR3C1, both critical regulators of the hypothalamic–pituitary–adrenal (HPA) axis, as well as a trend to decreased expression of BDNF and TRKB, central mediators of synaptic plasticity. Given the well-established role of miRNAs in gene regulation, we further investigated stress-associated miRNA expression changes and identified miR-20b-3p and miR-425-3p as significantly upregulated in the restraint-stressed group. Bioinformatics analysis predicted miR-20b-3p as a potential regulator of NR3C1, a relationship confirmed through RISC-mediated immunoenrichment, demonstrating increased miR-20b-3p binding to NR3C1 in stress-exposed rats. To confirm this interaction, we performed parallel analyses in cells ectopically expressing miR-20b-3p mimic, inhibitor, and a non-oligo control. Cells mimicking endogenous miR-20b-3p showed upregulated NR3C1 binding enrichment compared to non-transfected controls, while anti-miR-20b-3p treatment repressed its interaction with the NR3C1 3'UTR. These findings suggest that miR-20b-3p actively engages with NR3C1 and plays a regulatory role in its expression. Collectively, these results highlight a potential epigenetic mechanism by which chronic stress alters NR3C1 expression, possibly contributing to HPA axis dysregulation in MDD. The identification of miR-20b-3p as a key regulator of NR3C1 provides new insights into stress-induced molecular changes and suggests potential therapeutic targets for stress-associated psychiatric disorders.

The online version contains supplementary material available at 10.1007/s12035-025-05309-2.

## Linked entities

- **Genes:** CRHR2 (corticotropin releasing hormone receptor 2) [NCBI Gene 1395], NR3C1 (nuclear receptor subfamily 3 group C member 1) [NCBI Gene 2908], BDNF (brain derived neurotrophic factor) [NCBI Gene 627], NTRK2 (neurotrophic receptor tyrosine kinase 2) [NCBI Gene 4915]
- **Diseases:** Major depressive disorder (MONDO:0002009), MDD (MONDO:0012048)
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Bdnf (brain-derived neurotrophic factor) [NCBI Gene 24225], Mir425 (microRNA 425) [NCBI Gene 100314108] {aka rno-mir-425}, Nr3c1 (nuclear receptor subfamily 3, group C, member 1) [NCBI Gene 24413] {aka GR, Gcr, Grl}, Ntrk2 (neurotrophic receptor tyrosine kinase 2) [NCBI Gene 25054] {aka RATTRKB1, TRKB1, Tkrb, trk-B, trkB}, Crhr2 (corticotropin releasing hormone receptor 2) [NCBI Gene 64680] {aka CRF-R 2, CRH-R 2, Crf2r}
- **Diseases:** MDD (MESH:D003865), HPA axis dysregulation (MESH:D007029), psychiatric disorders (MESH:D001523)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12619829/full.md

## References

4 references — full list in the complete paper: https://tomesphere.com/paper/PMC12619829/full.md

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Source: https://tomesphere.com/paper/PMC12619829