# Bioprospecting of Plant-Beneficial Bacillus Species for Growth Promotion and Disease Suppression

**Authors:** Ruth Meike Jayanti, Ike Marisna, Jilan Tsani Abdullah, Suryanti, Tri Joko

PMC · DOI: 10.21315/tlsr2025.36.2.1 · 2025-07-31

## TL;DR

This study identifies two Bacillus species that can promote plant growth and reduce disease in shallots.

## Contribution

The study identifies and validates two Bacillus isolates with plant growth promotion and disease suppression potential.

## Key findings

- Bacillus isolates B-27 and RC76 showed plant-beneficial traits in laboratory and field tests.
- Combined treatment with B. velezensis B-27 and B. tropicus RC76 increased plant height and leaf number.
- B. velezensis B-27 reduced twisted disease intensity in shallots when applied by spraying.

## Abstract

Plant growth-promoting bacteria (PGPB) have been reported to promote plant growth and protect against plant diseases effectively. PGPB can control plant diseases through direct and indirect mechanisms. The direct mechanism involves the ability to provide nutrients and phytohormones. In contrast, the indirect mechanism refers to the ability to suppress the activity of pathogens through the production of various compounds and metabolites. The purpose of this study is to evaluate the plant health-promoting potential of Bacillus species. Several genetic determinants in 18 isolates of PGPB were investigated via polymerase chain reaction based on the genes fenD, sfp, bamC, ituA, aiiA, ipdC and nifH. Plant-beneficial traits were confirmed through seedling growth tests and in vitro antagonistic assays in the laboratory, followed by a field experiment that used selected Bacillus isolates to improve plant growth and control twisted disease in shallots. Results revealed that two Bacillus isolates, B-27 and RC76, have potential as PGPB. Isolates B-27 and RC76 were identified as Bacillus velezensis and B. tropicus, respectively, based on gyrB sequence analysis. The application of B. velezensis B-27 by spraying resulted in the lowest intensity of twisted disease in shallots. In addition, combined treatment with B. velezensis B-27 and B. tropicus RC76 increased plant height and leaf number.

## Linked entities

- **Genes:** fend (forked end) [NCBI Gene 31843], sfp (head scaffolding protein) [NCBI Gene 921034], bamC (BamABCDE complex OM biogenesis lipoprotein) [NCBI Gene 915254], aiiA (quorum-quenching N-acyl homoserine lactonase AiiA) [NCBI Gene 34214608], ipdC ((3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase) [NCBI Gene 11907237], nifH (nitrogenase iron protein) [NCBI Gene 1451768]
- **Species:** Bacillus velezensis (taxon 492670), Bacillus tropicus (taxon 2026188)

## Full-text entities

- **Diseases:** twisted disease (MESH:C562485)
- **Species:** Bacillus (genus) [taxon 55087]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12618084/full.md

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Source: https://tomesphere.com/paper/PMC12618084