# Modelling APOL1-mediated kidney inflammation and fibrosis using a partially reprogrammed urine-derived SIX2-positive renal progenitor cell line

**Authors:** Chantelle Thimm, Rosanne Mack, Osmond Adjei-Aruna, Wasco Wruck, Dalvir Kular, Ania Koziell, Kate Bramham, James Adjaye

PMC · DOI: 10.1186/s13287-025-04710-x · Stem Cell Research & Therapy · 2025-11-12

## TL;DR

Researchers created a renewable kidney cell line from urine that can model kidney inflammation and fibrosis caused by APOL1 gene variants.

## Contribution

A partially reprogrammed urine-derived renal progenitor cell line is developed for modeling APOL1-mediated kidney disease.

## Key findings

- UM30-OSN cells show rejuvenation with reduced senescence markers and increased proliferation genes.
- IFN-γ induces inflammation and fibrosis in UM30-OSN-derived podocytes, which is inhibited by Baricitinib.
- UM30-OSN cells correlate well with an established immortal podocyte line in gene expression.

## Abstract

CKD affects approximately 850 million people worldwide and is a leading cause of mortality. Podocytes, cells in the kidney are terminally differentiated and incapable of division in vivo making the establishment of primary cultures particularly challenging. The ability of cells to proliferate and avoid senescence is closely linked to telomere length. However, cellular senescence ensues when telomere length becomes critically shortened.

We present the successful rejuvenation of a human SIX2-positive renal progenitor cell line derived from the urine of a 30-year-old West African male (UM30-OSN). To achieve partial reprogramming, plasmids expressing the Yamanaka factors OCT4, SOX2, NANOG, c-Myc, and KLF4 were employed.

UM30-OSN expresses the pluripotency-associated marker SSEA4, renal stem cell markers such as SIX2, CD133 and CD24, determined by immunofluorescence, FACS and qPCR. Expression analysis revealed downregulation of senescence markers p21 and p53 and upregulation of proliferation-associated genes PCNA, KI67 and TERT, confirming rejuvenation. Upon podocyte differentiation, UM30-OSN cells expressed podocyte-specific markers NPHS1, NPHS2, SYNPO and CD2AP. Comparative transcriptome analyses revealed a correlation co-efficiency (R2 = 0.88) with the immortal podocyte line AB 8/13. To highlight the value of UM30-OSN in modeling APOL1-mediated kidney disease with an APOL1 (G1/G0) genotype, we examined how Interferon-γ (IFN-γ) affects UM30-OSN–derived podocytes and assessed whether the JAK1/JAK2 inhibitor Baricitinib can counteract IFN-γ–induced cellular responses. IFN-γ stimulation resulting in increased phosphorylation of STAT1, activation of APOL1, upregulation of pro-inflammatory and fibrotic markers such as, IL-6, TGF-β, Vimentin, Fibronectin, and morphological changes indicative of cell stress. Pre-treatment with Baricitinib effectively inhibited STAT1 phosphorylation, reduced expression of pro-inflammatory and fibrosis-associated genes, and preserved podocyte morphology.

Given their robust proliferation capacity, UM30-OSN cells represent a valuable additional model for investigating kidney-associated diseases such the contribution of APOL1 high-risk variants to kidney injury and fibrosis.

The online version contains supplementary material available at 10.1186/s13287-025-04710-x.

## Linked entities

- **Genes:** SIX2 (SIX homeobox 2) [NCBI Gene 10736], CDKN1A (cyclin dependent kinase inhibitor 1A) [NCBI Gene 1026], TP53 (tumor protein p53) [NCBI Gene 7157], PCNA (proliferating cell nuclear antigen) [NCBI Gene 5111], Mki67 (antigen identified by monoclonal antibody Ki 67) [NCBI Gene 17345], TERT (telomerase reverse transcriptase) [NCBI Gene 7015], NPHS1 (NPHS1 adhesion molecule, nephrin) [NCBI Gene 4868], NPHS2 (NPHS2 stomatin family member, podocin) [NCBI Gene 7827], SYNPO (synaptopodin) [NCBI Gene 11346], CD2AP (CD2 associated protein) [NCBI Gene 23607], IL6 (interleukin 6) [NCBI Gene 3569], TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040], PRELID1 (PRELI domain containing 1) [NCBI Gene 737446], fn1.S (fibronectin 1 S homeolog) [NCBI Gene 397744], APOL1 (apolipoprotein L1) [NCBI Gene 8542], STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772], JAK1 (Janus kinase 1) [NCBI Gene 3716], JAK2 (Janus kinase 2) [NCBI Gene 3717]
- **Chemicals:** Baricitinib (PubChem CID 44205240)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** PCNA (proliferating cell nuclear antigen) [NCBI Gene 5111] {aka ATLD2}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}, H3P16 (H3 histone pseudogene 16) [NCBI Gene 644914] {aka H3.6, H3F3AP6, p21}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, TERT (telomerase reverse transcriptase) [NCBI Gene 7015] {aka CMM9, DKCA2, DKCB4, EST2, PFBMFT1, TCS1}, NPHS1 (NPHS1 adhesion molecule, nephrin) [NCBI Gene 4868] {aka CNF, NPHN, nephrin}, APOL1 (apolipoprotein L1) [NCBI Gene 8542] {aka APO-L, APOL, APOL-I, FSGS4}, KLF4 (KLF transcription factor 4) [NCBI Gene 9314] {aka EZF, GKLF}, FN1 (fibronectin 1) [NCBI Gene 2335] {aka CIG, ED-B, FINC, FN, FNZ, GFND}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, POU5F1 (POU class 5 homeobox 1) [NCBI Gene 5460] {aka OCT3, OCT4, OCT4Borf1, OTF-3, OTF3, OTF4}, CD2AP (CD2 associated protein) [NCBI Gene 23607] {aka CMS}, PROM1 (prominin 1) [NCBI Gene 8842] {aka AC133, CD133, CORD12, MCDR2, MSTP061, PROML1}, VIM (vimentin) [NCBI Gene 7431], SOX2 (SRY-box transcription factor 2) [NCBI Gene 6657] {aka ANOP3, MCOPS3}, SIX2 (SIX homeobox 2) [NCBI Gene 10736], NANOG (Nanog homeobox) [NCBI Gene 79923], JAK1 (Janus kinase 1) [NCBI Gene 3716] {aka AIIDE, JAK1A, JAK1B, JTK3}, SYNPO (synaptopodin) [NCBI Gene 11346] {aka SYNPO1}, JAK2 (Janus kinase 2) [NCBI Gene 3717] {aka JTK10}, CD24 (CD24 molecule) [NCBI Gene 100133941] {aka CD24A}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, NPHS2 (NPHS2 stomatin family member, podocin) [NCBI Gene 7827] {aka PDCN, SRN1}
- **Diseases:** inflammatory (MESH:D007249), kidney disease (MESH:D007674), CKD (MESH:D012080), fibrosis (MESH:D005355)
- **Chemicals:** Baricitinib (MESH:C000596027)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** UM30-OSN — Homo sapiens (Human), Pyriform fossa squamous cell carcinoma, Cancer cell line (CVCL_7741), AB 8/13 — Homo sapiens (Human), Conditionally immortalized cell line (CVCL_W186)

## Full text

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## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12613565/full.md

## References

14 references — full list in the complete paper: https://tomesphere.com/paper/PMC12613565/full.md

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Source: https://tomesphere.com/paper/PMC12613565