# The sigma-1 receptor as a neurohomeostatic decision hub for GABARAP-mediated receptor trafficking and macroautophagy

**Authors:** Marius Wilhelm Baeken, Fazilet Bekbulat, Hagen Körschgen, Albrecht Martin Clement, Christian Behl

PMC · DOI: 10.3389/fmolb.2025.1673249 · Frontiers in Molecular Biosciences · 2025-10-30

## TL;DR

This paper explores how the sigma-1 receptor influences GABARAP's role in autophagy and receptor trafficking, potentially offering new therapeutic strategies for neurodegenerative diseases.

## Contribution

The paper introduces the sigma-1 receptor as a regulatory hub that directs GABARAP function between autophagy and membrane trafficking.

## Key findings

- σ1R interacts directly with GABARAP, influencing its functional commitment to autophagy or membrane trafficking.
- Ligand-dependent σ1R activation promotes autophagy over membrane transport, which may explain neuroprotective effects in disease models.
- The σ1R-GABARAP crosstalk could be leveraged pharmacologically to enhance autophagy in neurodegenerative diseases.

## Abstract

Gamma-aminobutyric acid receptor-associated protein (GABARAP) is a multifunctional member of the autophagy-related (ATG8) protein family, playing key roles in two distinct cellular pathways: macroautophagy and plasma membrane protein trafficking. In the context of autophagy, GABARAP modulates cargo recognition and supports the maturation and fusion of autophagosomes with lysosomes, a critical step in intracellular clearance and proteostasis. Separately, GABARAP also regulates vesicular receptor protein transport from the Golgi apparatus to the plasma membrane, contributing to proper surface localization and receptor recycling. Both tasks are especially vital for neurons, where protein turnover and receptor localization are tightly linked to synaptic plasticity and neuroprotection. We recently identified a direct interaction between GABARAP and the sigma-1 receptor (σ1R), an ER-resident receptor involved in diverse cellular stress responses, mitochondrial function, and protein homeostasis. Our findings suggest that σ1R acts as an upstream regulatory hub, influencing GABARAP’s functional commitment to either membrane trafficking or autophagy. Specifically, we hypothesize that ligand-dependent σ1R activation promotes GABARAP’s involvement in macroautophagy at the expense of its role in membrane transport. This regulatory switch may underline part of the neuroprotective effects observed with σ1R agonists in neurodegenerative disease models, where enhanced autophagy is often beneficial. Overall, we discuss the emerging molecular crosstalk between σ1R and GABARAP, its potential impact on neuronal homeostasis, and how σ1R’s pharmacological modulation might be leveraged to bias GABARAP function toward autophagy in diseases such as amyotrophic lateral sclerosis, Huntington’s, Parkinson’s, and Alzheimer’s disease.

Illustration depicting a biological process involving GABARAP in cellular autophagy. On the left, under "IF," GABARAP is linked with Golgi and amino acid deficiency, leading to activity at the GABA receptor. On the right, under "THEN," GABARAP is integrated into autophagy involving lysosomes. The diagram highlights cellular components and pathways between these conditions, indicating a conditional relationship.

## Linked entities

- **Genes:** GABARAP (GABA type A receptor-associated protein) [NCBI Gene 11337]
- **Proteins:** GABARAP (GABA type A receptor-associated protein)
- **Diseases:** amyotrophic lateral sclerosis (MONDO:0004976), Alzheimer’s disease (MONDO:0004975)

## Full-text entities

- **Genes:** SIGMAR1 (sigma non-opioid intracellular receptor 1) [NCBI Gene 10280] {aka ALS16, DSMA2, HMNR2, OPRS1, SIG-1R, SR-BP}, GABARAPL1 (GABA type A receptor associated protein like 1) [NCBI Gene 23710] {aka APG8-LIKE, APG8L, ATG8, ATG8B, ATG8L, GEC1}, GABARAP (GABA type A receptor-associated protein) [NCBI Gene 11337] {aka ATG8A, GABARAP-a, MM46}
- **Diseases:** Parkinson's (MESH:D010300), amyotrophic lateral sclerosis (MESH:D000690), neurodegenerative disease (MESH:D019636), Alzheimer's disease (MESH:D000544), Huntington's (MESH:D006816)

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12611829/full.md

## References

91 references — full list in the complete paper: https://tomesphere.com/paper/PMC12611829/full.md

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Source: https://tomesphere.com/paper/PMC12611829