# Transcriptomic and experimental evidence confirm the potential of disulfidptosis-related signature for the early diagnosis and treatment of liver cirrhosis

**Authors:** Yiqian Liu, Ruixin Zhang, Xiaojie Sun, Wei Cui, Lixin Liu

PMC · DOI: 10.1371/journal.pone.0334459 · PLOS One · 2025-11-12

## TL;DR

This study identifies six genes linked to disulfidptosis that could help diagnose and treat liver cirrhosis early.

## Contribution

The study introduces a disulfidptosis-related gene signature for early cirrhosis diagnosis and treatment.

## Key findings

- Six hub genes (CXCL12, COL1A1, CXCR4, COL1A2, CCR7, and CXCL8) are associated with disulfidptosis in cirrhosis.
- CCR7, CXCL12, CXCR4, and CXCL8 show potential as diagnostic biomarkers and therapeutic targets.
- Immune cell infiltration is positively correlated and linked to disulfidptosis-related pathways in cirrhosis.

## Abstract

Cirrhosis is a common endpoint in various chronic liver diseases, and often causes hepatocellular carcinoma. Studies have revealed the significant role of disulfidptosis in the occurrence and development of hepatocellular carcinoma; however, our understanding of this role is limited. Therefore, we aimed to identify potential disulfidptosis-related biomarkers for cirrhosis. We obtained the gene expression data of patients with cirrhosis from the Gene Expression Omnibus (GEO) database. Subsequently, weighted gene co-expression network analysis was performed, and the “limma” package was used to screen for differentially expressed genes (DEGs) associated with disulfidptosis. Significantly altered biological pathways were identified using Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Set Enrichment Analysis (GSEA), and Gene Set Variation Analysis (GSVA). We constructed protein–protein interaction (PPI) networks using GeneMANIA and generated receiver operating characteristic (ROC) curves to identify hub-shared genes. Additionally, we assessed the distribution of immune cell populations in cirrhotic and control specimens using single-sample GSEA (ssGSEA) and explored their relationship with hub genes. Six hub genes (CXCL12, COL1A1, CXCR4, COL1A2, CCR7, and CXCL8) were closely associated with disulfidptosis-related DEGs. Further immunohistochemical experiments confirmed the potential of CCR7, CXCL12, CXCR4, and CXCL8 as novel diagnostic biomarkers and suggested their potential as new therapeutic targets. These genes mainly promote the development of liver cirrhosis through the oxidative metabolism and cytokine pathways. Furthermore, we observed positive correlations among 23 of the 28 types of immune cells. This study highlights the potential utility of immune cell infiltration and efficient disulfidptosis-related early diagnostic biomarkers in cirrhosis, and highlights its strong useful as a therapeutic target, offering potential clinical application value.

## Linked entities

- **Genes:** CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387], COL1A1 (collagen type I alpha 1 chain) [NCBI Gene 1277], CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852], COL1A2 (collagen type I alpha 2 chain) [NCBI Gene 1278], CCR7 (C-C motif chemokine receptor 7) [NCBI Gene 1236], CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576]
- **Diseases:** cirrhosis (MONDO:0005155), hepatocellular carcinoma (MONDO:0007256)

## Full-text entities

- **Genes:** COL1A2 (collagen type I alpha 2 chain) [NCBI Gene 1278] {aka EDSARTH2, EDSCV, OI4}, CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, COL1A1 (collagen type I alpha 1 chain) [NCBI Gene 1277] {aka CAFYD, EDSARTH1, EDSC, OI1, OI2, OI3}, CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852] {aka CD184, D2S201E, FB22, HM89, HSY3RR, LCR1}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, CCR7 (C-C motif chemokine receptor 7) [NCBI Gene 1236] {aka BLR2, CC-CKR-7, CCR-7, CD197, CDw197, CMKBR7}
- **Diseases:** liver diseases (MESH:D008107), cirrhotic (MESH:D000094724), liver cirrhosis (MESH:D008103), hepatocellular carcinoma (MESH:D006528), Cirrhosis (MESH:D005355)
- **Chemicals:** disulfidptosis (-)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

42 references — full list in the complete paper: https://tomesphere.com/paper/PMC12611156/full.md

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Source: https://tomesphere.com/paper/PMC12611156