# Lipidomic Signature of Patients with Familial Hypercholesterolemia Carrying Pathogenic Variants Unveils a Cue of Increased Cardiovascular Risk

**Authors:** Giulia De Simone, Maria Donata Di Taranto, Debora Paris, Martina Ferrandino, Marco Andolfi, Annalaura Iodice, Giovanna Cardiero, Carmine De Luca, Luigi Junior Valletta, Ilenia Lorenza Calcaterra, Gabriella Iannuzzo, Matteo Nicola Dario Di Minno, Giuliana Fortunato, Adele Cutignano

PMC · DOI: 10.3390/ijms262110688 · 2025-11-03

## TL;DR

This study identifies unique lipid patterns in patients with a genetic form of high cholesterol, which may explain their higher risk of heart disease.

## Contribution

The study reveals a distinct lipidomic signature in FH patients with pathogenic variants, potentially explaining increased cardiovascular risk.

## Key findings

- Lipid classes were elevated in FH patients compared to healthy controls.
- Sphingomyelins distinguished HeFH from FH/V−/USV− patients.
- Lipidomic differences correlate with cardiovascular risk in HeFH patients.

## Abstract

Familial Hypercholesterolemia (FH) is a common genetic disorder characterized by elevated LDL-cholesterol levels and an increased risk of premature cardiovascular disease. While pathogenic variants in LDLR, APOB, and PCSK9 are well-established causes, a substantial proportion of clinically suspected FH cases do not carry either pathogenic variants or rare variants of uncertain significance in these genes (FH/V−/USV−). This study aimed to characterize the metabolome/lipidome of genetically confirmed heterozygous FH (HeFH) patients compared to FH/V−/USV−, seeking to identify specific alterations associated with genetic status and phenotypic variability. Untargeted high-resolution mass spectrometry (UHPLC-Q-Exactive-MS)-based lipidomics and nuclear magnetic resonance-based metabolomics were performed on plasma samples of FH patients (n = 20 HeFH and n = 19 FH/V−/USV−) towards healthy controls (n = 22). PLS-DA analysis revealed group-level separation, suggesting differences in the circulating metabolome/lipidome. As expected, most of identified lipid classes were higher in both FH groups compared to normolipidemic controls. Notably, significant lipids (VIP > 1, p < 0.05) showed potential in distinguishing HeFH and FH/V−/USV− patients, particularly sphingomyelins. These data were confirmed by multivariable regression analysis controlling for age, sex, and lipid-lowering therapy as well as by ROC analysis. The evidence of a distinct lipidome signature in the HeFH subgroup may relate to the increased cardiovascular risk of HeFH patients compared to patients without pathogenic variants.

## Linked entities

- **Genes:** LDLR (low density lipoprotein receptor) [NCBI Gene 3949], APOB (apolipoprotein B) [NCBI Gene 338], PCSK9 (proprotein convertase subtilisin/kexin type 9) [NCBI Gene 255738]
- **Diseases:** Familial Hypercholesterolemia (MONDO:0005439), cardiovascular disease (MONDO:0004995)

## Full-text entities

- **Genes:** VIP (vasoactive intestinal peptide) [NCBI Gene 7432] {aka PHM27}, PCSK9 (proprotein convertase subtilisin/kexin type 9) [NCBI Gene 255738] {aka FH3, FHCL3, HCHOLA3, LDLCQ1, NARC-1, NARC1}, APOB (apolipoprotein B) [NCBI Gene 338] {aka FCHL2, FLDB, LDLCQ4, apoB-100, apoB-48}, LDLR (low density lipoprotein receptor) [NCBI Gene 3949] {aka LDLCQ2}
- **Diseases:** FH (MESH:D006938), genetic disorder (MESH:D030342), cardiovascular disease (MESH:D002318), V (MESH:D015419)
- **Chemicals:** sphingomyelins (MESH:D013109), lipid (MESH:D008055)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12609719/full.md

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Source: https://tomesphere.com/paper/PMC12609719