# Screening of Microbial Isolates from Tomato Plants (Solanum lycopersicum L.) for Bioprotective Potential: From Isolation to Food Model System Application

**Authors:** Laura Rabasco-Vílchez, Araceli Bolívar, María Julia Ruiz, Narjes Harrazi, Jérôme Mounier, Emmanuel Coton, Luis M. Medina, Fernando Pérez-Rodríguez

PMC · DOI: 10.3390/foods14213713 · Foods · 2025-10-30

## TL;DR

This study identifies bacteria from tomato plants that could help preserve food by inhibiting harmful microbes.

## Contribution

The study identifies acid-tolerant Bacillus strains from tomato microbiota with bioprotective potential for food preservation.

## Key findings

- Bacillus isolate TRB1-7 moderately inhibited L. monocytogenes.
- Bacillus isolates showed significant antifungal activity against F. oxysporum and C. acutatum.
- Only B. aerius isolate BRZ3-2 inhibited F. oxysporum under acidic tomato conditions.

## Abstract

This study explores tomato agri-food residues as sources of bacteria with bioprotective potential to enhance product shelf-life and safety. A total of 245 bacterial strains were isolated, comprising predominantly Pseudomonas (52%) and Bacillus (44%) spp., with lactic acid bacteria (LAB) present at lower levels (4%). The antimicrobial activity of these isolates was assessed against pathogenic and spoilage bacteria and phytopathogenic molds. Notably, the Bacillus isolate TRB1-7 exhibited moderate activity against L. monocytogenes (inhibition halo diameter: 10.64 mm), while Pseudomonas and LAB isolates showed limited or no inhibition. Antifungal assays highlighted significant antifungal potential for Bacillus isolates. Results showed that 16% and 15% of the 245 isolates inhibited F. oxysporum and C. acutatum growth, respectively. Nine of these isolates underwent acid-adaptation and were evaluated against the selected molds using Potato Dextrose Agar (PDA) at pH 4.0 to simulate tomato conditions. Only isolate BRZ3-2, identified as B. aerius, was adapted to acidic conditions and inhibited F. oxysporum by 25%. Experiments on tomato-based agar at the same pH showed no inhibition by Bacillus isolates. These results suggest that tomato microbiota harbors acid-tolerant Bacillus strains with potential for post-harvest bio-preservation. Further studies on strains TRB1-7 and BRZ3-2 are required to develop effective bioprotective applications.

## Linked entities

- **Species:** Bacillus (taxon 1386), Pseudomonas (taxon 286)

## Full-text entities

- **Chemicals:** PDA (-), agar (MESH:D000362)
- **Species:** Listeria monocytogenes (species) [taxon 1639], Bracteacoccus aerius (species) [taxon 50041], Colletotrichum acutatum (species) [taxon 27357], Pseudomonas (RNA similarity group I, genus) [taxon 286], Leptospira sp. AB (species) [taxon 103236], Bacillus (genus) [taxon 55087], Solanum lycopersicum (tomato, species) [taxon 4081], Fusarium oxysporum (species) [taxon 5507], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395]
- **Cell lines:** BRZ3-2 — Homo sapiens (Human), Ewing sarcoma, Cancer cell line (CVCL_H724), TRB1-7 — Mus musculus (Mouse), Hybridoma (CVCL_C2DU)

## Full text

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## Figures

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## References

82 references — full list in the complete paper: https://tomesphere.com/paper/PMC12607484/full.md

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Source: https://tomesphere.com/paper/PMC12607484