# Comparative transcription profiles of Candidatus Accumulibacter and Propionivibrio under phosphate limitation in sequencing batch reactors

**Authors:** Laëtitia Cardona, Pilar Natalia Rodilla Ramírez, Aline Adler, Christof Holliger

PMC · DOI: 10.3389/fmicb.2025.1650167 · Frontiers in Microbiology · 2025-10-28

## TL;DR

This study compares how different bacteria adapt their metabolism when phosphate is limited in wastewater treatment systems.

## Contribution

The study provides new insights into the metabolic shifts of Accumulibacter and Propionivibrio under phosphate limitation using metatranscriptomics.

## Key findings

- Accumulibacter species shifted to glycogen-accumulating metabolism when phosphate was limited.
- Transcription of ethylmalonyl-CoA pathway genes increased in type I Accumulibacter under low-phosphate conditions.
- Propionivibrio and type II Accumulibacter showed enhanced methylmalonyl-CoA pathway transcription under low phosphate.

## Abstract

Polyphosphate-accumulating organisms (PAOs) play a crucial role in enhanced biological phosphorus removal (EBPR) processes. In addition to biosynthesis, they rely on phosphate for energy generation. However, Candidatus Accumulibacter, a model PAO, has been shown to adapt to low phosphate conditions by switching to a glycogen-accumulating metabolism (GAM), with variable success across genus members and experiments. This study aimed to explore the metabolic shift of several Accumulibacter species subjected to low-phosphate concentration in different operating conditions using metatranscriptomics analysis. Furthermore, the study enabled a comparison of the transcriptomic profiles of Accumulibacter with those of Propionivibrio, a glycogen-accumulating organism typically found in EBPR plants. Two sequencing batch reactors were operated with different carbon sources to enrich for different populations of Accumulibacter. After decreasing the influent phosphate concentration, carbon removal performance was maintained while anaerobic phosphate release dropped dramatically, suggesting a shift from a phosphate-accumulating to a glycogen-accumulating metabolism. Analysis of metatranscriptomics data indicated that Accumulibacter regalis (type I) and Propionivibrio aalborgensis remained the most abundant species after the phosphate decrease in the reactor with acetate-propionate and allylthiourea, while Accumulibacter delftensis (type I) and Accumulibacter phosphatis (type II) remained active in the reactor with acetate-glucose and no allylthiourea. Transcription of the genes from the ethylmalonyl-CoA pathway involved in the production of propionyl-CoA and regulation of the anaerobic redox balance was enhanced under low-phosphate conditions, especially for type I Accumulibacter. Conversely, the transcription of the methylmalonyl-CoA pathway was enhanced under low-phosphate conditions in Propionivibrio and type II Accumulibacter.

## Linked entities

- **Chemicals:** allylthiourea (PubChem CID 1549517)
- **Species:** Candidatus Accumulibacter (taxon 327159), Propionivibrio (taxon 83766)

## Full-text entities

- **Chemicals:** propionate (MESH:D011422), carbon (MESH:D002244), phosphate (MESH:D010710), glycogen (MESH:D006003), phosphorus (MESH:D010758), methylmalonyl-CoA (MESH:C015357), allylthiourea (MESH:C009842), propionyl-CoA (MESH:C009061), ethylmalonyl-CoA (MESH:C102829), acetate (MESH:D000085), glucose (MESH:D005947)
- **Species:** Candidatus Propionivibrio aalborgensis (species) [taxon 1860101], Candidatus Accumulibacter (genus) [taxon 327159], Candidatus Accumulibacter phosphatis (species) [taxon 327160]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12604563/full.md

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12604563/full.md

## References

81 references — full list in the complete paper: https://tomesphere.com/paper/PMC12604563/full.md

---
Source: https://tomesphere.com/paper/PMC12604563