# Dual effects of the alternative spliced RIG-I isoform PTIR1 on host antiviral defense and immune homeostasis

**Authors:** Jia Song, Wenyu Tian, Lulu Liu, Xuyang Zhao, Wei Zhao, Dan Lu

PMC · DOI: 10.1038/s41419-025-08159-x · Cell Death & Disease · 2025-11-10

## TL;DR

PTIR1, a primate-specific RIG-I isoform, suppresses antiviral and inflammatory immune responses to prevent tissue damage.

## Contribution

Discovery of PTIR1 as a novel negative regulator of innate immune signaling through deubiquitination and interference with RIG-I.

## Key findings

- PTIR1 suppresses inflammatory responses in vivo via UCHL5 activation and STAT1 ubiquitination inhibition.
- PTIR1 limits RIG-I signaling by disrupting dimerization and MAVS interaction, aiding viral immune evasion.
- PTIR1 acts as a post-transcriptional checkpoint to balance antiviral defense and immune homeostasis.

## Abstract

Efficient pathogen recognition must be tightly regulated to prevent immunopathology. Here, we identify PTIR1, a primate-specific splice variant of DDX58 lacking exon 4 and encoding a truncated RIG-I isoform, as a negative regulator of innate immune signaling. PTIR1 is selectively induced upon viral infection or interferon (IFN) stimulation, and its ectopic expression via adenoviral delivery broadly suppresses inflammatory responses in vivo. Mechanistically, PTIR1 activates the deubiquitinase UCHL5 to limit STAT1 ubiquitination at lysine 525, thereby impairing STAT1 nuclear translocation and dampening type I and type II IFN responses. Accordingly, in a model of autoimmune hepatitis, PTIR1 restricts IFN-γ-driven inflammation, and in a viral infection model, it attenuates type I IFN responses. PTIR1 also modulates RIG-I signaling by interfering with its dimerization, reducing its ubiquitination, and disrupting its interaction with MAVS, thereby limiting RIG-I-mediated antiviral recognition and facilitating viral immune evasion. These findings identify PTIR1 as an inducible post-transcriptional checkpoint that fine-tunes antiviral and inflammatory signaling to preserve tissue integrity.

## Linked entities

- **Genes:** RIGI (RNA sensor RIG-I) [NCBI Gene 23586], RIGI (RNA sensor RIG-I) [NCBI Gene 23586], STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772], UCHL5 (ubiquitin C-terminal hydrolase L5) [NCBI Gene 51377], MAVS (mitochondrial antiviral signaling protein) [NCBI Gene 57506]
- **Proteins:** RIGI (RNA sensor RIG-I), UCHL5 (ubiquitin C-terminal hydrolase L5), STAT1 (signal transducer and activator of transcription 1), MAVS (mitochondrial antiviral signaling protein)
- **Diseases:** autoimmune hepatitis (MONDO:0016264)

## Full-text entities

- **Genes:** UCHL5 (ubiquitin C-terminal hydrolase L5) [NCBI Gene 51377] {aka CGI-70, INO80R, UCH-L5, UCH37}, MAVS (mitochondrial antiviral signaling protein) [NCBI Gene 57506] {aka CARDIF, IPS-1, IPS1, VISA}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}, RIGI (RNA sensor RIG-I) [NCBI Gene 23586] {aka DDX58, RIG-I, RIG1, RLR-1, SGMRT2}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, IFNA1 (interferon alpha 1) [NCBI Gene 3439] {aka IFL, IFN, IFN-ALPHA, IFN-alphaD, IFNA13, IFNA@}
- **Diseases:** inflammation (MESH:D007249), viral infection (MESH:D014777), autoimmune hepatitis (MESH:D019693)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12603114/full.md

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Source: https://tomesphere.com/paper/PMC12603114