# FGF2 supports NANOG expression via pyruvate dehydrogenase–dependent histone acetylation under low oxygen conditions

**Authors:** Petr Fojtík, Martin Senfluk, Katerina Holomkova, Anton Salykin, Jana Gregorova, Pavel Smak, Ondrej Pes, Jan Raska, Deborah Beckerova, Monika Stetkova, Petr Skladal, Miroslava Sedlackova, Ales Hampl, Dasa Bohaciakova, Stjepan Uldrijan, Vladimir Rotrekl

PMC · DOI: 10.3389/fcell.2025.1623814 · Frontiers in Cell and Developmental Biology · 2025-10-28

## TL;DR

This study shows how a protein called PDH helps maintain stem cell pluripotency by controlling histone acetylation under low oxygen conditions.

## Contribution

The study identifies a new FGF2–MEK1/2–ERK1/2–ROS signaling axis that regulates PDH activity in a redox-sensitive and oxygen-dependent manner.

## Key findings

- Active PDH promotes histone H3 acetylation and NANOG expression under 5% oxygen.
- A novel FGF2–MEK1/2–ERK1/2–ROS signaling axis regulates PDH activity.
- This regulation is oxygen-dependent and absent under atmospheric oxygen levels.

## Abstract

The safe and effective application of human pluripotent stem cells (hPSCs) in research and regenerative medicine requires precise control over pluripotency and cell fate. Pluripotency is characterized by high histone acetylation and aerobic glycolysis, while differentiation involves metabolic remodeling and reduced acetylation. Pyruvate dehydrogenase (PDH) links these processes by converting glycolytic pyruvate into acetyl coenzyme A (Ac-CoA), the key substrate for histone acetylation.

We investigated how PDH activity regulates histone acetylation and pluripotency maintenance under physiologically relevant oxygen levels (5% and 21% O₂). PDH contribution to histone acetylation was assessed using a specific PDH inhibitor, followed by rescue experiments with acetyl-CoA precursors. hPSCs were exposed to variations in FGF2 signaling and reactive oxygen species (ROS) using H₂O₂ treatment to evaluate redox-dependent modulation of PDH and downstream effects on pluripotency factors. Protein levels and post-translational modifications were analyzed by Western blotting and quantitative PCR, relative metabolite concentrations by LC–MS, and ROS levels by fluorescence microscopy.

Active PDH promoted global histone H3 acetylation and upregulated the expression of the pluripotency factor NANOG, specifically under 5% O₂. Mechanistic analysis revealed a novel FGF2–MEK1/2–ERK1/2–ROS signaling axis that regulates PDH activity through redox-sensitive mechanisms. This regulatory pathway was oxygen-dependent and absent under atmospheric oxygen levels (21% O₂).

These findings identify PDH as a redox-sensitive metabolic switch connecting cellular metabolism with the epigenetic control of pluripotency by modulating Ac-CoA availability.

Our study highlights the importance of oxygen tension, ROS homeostasis, and growth factor signaling in shaping the metabolic–epigenetic landscape of hPSCs, with implications for optimizing stem cell culture and differentiation protocols.

## Linked entities

- **Genes:** NANOG (Nanog homeobox) [NCBI Gene 79923], FGF2 (fibroblast growth factor 2) [NCBI Gene 2247], Dsor1 (Downstream of raf1) [NCBI Gene 31872], erk1/2 (mitogen-activated protein kinase) [NCBI Gene 778596]
- **Chemicals:** acetyl coenzyme A (PubChem CID 181)

## Full-text entities

- **Genes:** PDP1 (pyruvate dehydrogenase phosphatase catalytic subunit 1) [NCBI Gene 54704] {aka PDH, PDP, PDPC, PDPC 1, PPM2A, PPM2C}, FGF2 (fibroblast growth factor 2) [NCBI Gene 2247] {aka BFGF, FGF-2, FGFB, HBGF-2}, NANOG (Nanog homeobox) [NCBI Gene 79923]
- **Chemicals:** H2O2 (MESH:D006861), ROS (MESH:D017382), O2 (MESH:D010100), pyruvate (MESH:D019289), Ac-CoA (MESH:D000105)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12602506/full.md

## References

107 references — full list in the complete paper: https://tomesphere.com/paper/PMC12602506/full.md

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Source: https://tomesphere.com/paper/PMC12602506